HHsearch alignment for GI: 254780809 and conserved domain: cd03244
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=96.14 E-value=0.011 Score=38.51 Aligned_cols=45 Identities=29% Similarity=0.315 Sum_probs=34.2
Q ss_pred HHHCCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEE
Q ss_conf 320230243114663188899998552000234546872110001245683589995
Q gi|254780809|r 216 IRNGYKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKIS 272 (440)
Q Consensus 216 l~~g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~ 272 (440)
T Consensus 27 i~~Ge~v~ivG~sGsGKSTLl~ll~gl~~----p--------~~G~I~i~g~~i~~~ 71 (221)
T cd03244 27 IKPGEKVGIVGRTGSGKSSLLLALFRLVE----L--------SSGSILIDGVDISKI 71 (221)
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHCCCC----C--------CCCEEEECCEECCCC
T ss_conf 86998999999999989999999967971----8--------984899999996619