HHsearch alignment for GI: 254780809 and conserved domain: cd04138
>cd04138 H_N_K_Ras_like H-Ras/N-Ras/K-Ras subfamily. H-Ras, N-Ras, and K-Ras4A/4B are the prototypical members of the Ras family. These isoforms generate distinct signal outputs despite interacting with a common set of activators and effectors, and are strongly associated with oncogenic progression in tumor initiation. Mutated versions of Ras that are insensitive to GAP stimulation (and are therefore constitutively active) are found in a significant fraction of human cancers. Many Ras guanine nucleotide exchange factors (GEFs) have been identified. They are sequestered in the cytosol until activation by growth factors triggers recruitment to the plasma membrane or Golgi, where the GEF colocalizes with Ras. Active (GTP-bound) Ras interacts with several effector proteins that stimulate a variety of diverse cytoplasmic signaling activities. Some are known to positively mediate the oncogenic properties of Ras, including Raf, phosphatidylinositol 3-kinase (PI3K), RalGEFs, and Tiam1.
Probab=99.43 E-value=6.6e-13 Score=109.33 Aligned_cols=133 Identities=26% Similarity=0.330 Sum_probs=93.0
Q ss_pred CCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCE--EEEEEECCHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 302431146631888999985520002345468721100012456835--899950810002410356666788899850
Q gi|254780809|r 220 YKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGY--LVKISDTAGIRETDDIVEKEGIKRTFLEVE 297 (440)
Q Consensus 220 ~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~--~~~l~DTaGir~t~d~IE~~GI~ra~~~i~ 297 (440)
T Consensus 2 ~KvvlvGd~~VGKTsli~r~~~~~F--~~~y~~Ti~~~~~k~~~i~~~~~~l~iwDtaG~e~~~--------~l~~~~~~ 71 (162)
T cd04138 2 YKLVVVGAGGVGKSALTIQLIQNHF--VDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYS--------AMRDQYMR 71 (162)
T ss_pred EEEEEECCCCCCHHHHHHHHHHCCC--CCCCCCCCCCEEEEEEEECCEEEEEEEEECCCCCCCC--------HHHHHHHC
T ss_conf 3999989999889999999983928--8756885552799999999999999999799860111--------47898715
Q ss_pred HHCCEEECCCCCCHHHHHH-------------HCCCCCCCCCCCCCCCCCCCHH------------HHHHHHHHHHHHHH
Q ss_conf 3011020135898566343-------------1289853222233344654200------------00013333232358
Q gi|254780809|r 298 NADLILLLKEINSKKEISF-------------PKNIDFIFIGTKSDLYSTYTEE------------YDHLISSFTGEGLE 352 (440)
Q Consensus 298 ~aDlil~v~D~~~~~~~~~-------------~~~~~~i~V~NK~Dl~~~~~~~------------~~~~ISaktg~Gi~ 352 (440)
T Consensus 72 ~a~~~ilvydvt~~~Sf~~v~~w~~~i~~~~~~~~~piilVgNK~Dl~~r~V~~~e~~~~a~~~~~~f~E~SAk~~~nV~ 151 (162)
T cd04138 72 TGEGFLCVFAINSRKSFEDIHTYREQIKRVKDSDDVPMVLVGNKCDLAARTVSSRQGQDLAKSYGIPYIETSAKTRQGVE 151 (162)
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCHH
T ss_conf 78779999617988999989999999998548888549999765356455588999999999809989997389985989
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999996
Q gi|254780809|r 353 ELINKIKSIL 362 (440)
Q Consensus 353 ~L~~~I~~~l 362 (440)
T Consensus 152 e~F~~l~~~I 161 (162)
T cd04138 152 EAFYTLVREI 161 (162)
T ss_pred HHHHHHHHHC
T ss_conf 9999999963