HHsearch alignment for GI: 254780809 and conserved domain: pfam00009
>pfam00009 GTP_EFTU Elongation factor Tu GTP binding domain. This domain contains a P-loop motif, also found in several other families such as pfam00071, pfam00025 and pfam00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.
Probab=99.83 E-value=8.4e-21 Score=164.15 Aligned_cols=136 Identities=23% Similarity=0.230 Sum_probs=100.9
Q ss_pred CCEEEECCCCCCHHHHHHHHHCCHHCCCCCCC----------------CCCEEECCCCCCCCCEEEEEEECCHHCCCCHH
Q ss_conf 30243114663188899998552000234546----------------87211000124568358999508100024103
Q gi|254780809|r 220 YKIVILGHSNAGKSSLFNALAKKDVAIVTDIP----------------GTTRDVLTIDLDLEGYLVKISDTAGIRETDDI 283 (440)
Q Consensus 220 ~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~----------------GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~ 283 (440)
T Consensus 4 rnVaivG~~n~GKSTL~n~Ll~~~~~i~~~~~~~~~~~~d~~~~E~~rgiTi~~~~~~~~~~~~~i~~iDtPGh~~f--- 80 (185)
T pfam00009 4 RNIGIIGHVDHGKTTLTDALLYVTGAIDKRGEVKQEGELDRLKEERERGITIKIAAVSFETKKRHINIIDTPGHVDF--- 80 (185)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEEEEEECCCEEEEEECCCCCCH---
T ss_conf 78999938994499999999715487654643100333365588885782698769999608936899989987143---
Q ss_pred HHHHHHHHHHHHHHHHCCEEECCCCCCHHH--------HHHHCCCCCCCCCCCCCCCCCCCH------------------
Q ss_conf 566667888998503011020135898566--------343128985322223334465420------------------
Q gi|254780809|r 284 VEKEGIKRTFLEVENADLILLLKEINSKKE--------ISFPKNIDFIFIGTKSDLYSTYTE------------------ 337 (440)
Q Consensus 284 IE~~GI~ra~~~i~~aDlil~v~D~~~~~~--------~~~~~~~~~i~V~NK~Dl~~~~~~------------------ 337 (440)
T Consensus 81 -----~~~~~~~l~~aD~~vlVvda~~G~~~qt~~~~~~~~~~~~p~iv~vNKiD~v~~~~~~~~~~e~~~~ll~~~~~~ 155 (185)
T pfam00009 81 -----TKEMIRGAAQADGAILVVDAVEGVMPQTREHLLLAKQLGVPIIVFINKMDRVDDAELDEVVEEISRELLEKYGFG 155 (185)
T ss_pred -----HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf -----999999986465642999867685323099999999828987999977327776769999999999988873248
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ---00001333323235899999999963
Q gi|254780809|r 338 ---EYDHLISSFTGEGLEELINKIKSILS 363 (440)
Q Consensus 338 ---~~~~~ISaktg~Gi~~L~~~I~~~l~ 363 (440)
T Consensus 156 ~~~~pivpiSA~~G~gv~~Ll~~i~~~lP 184 (185)
T pfam00009 156 GETIPVIPGSALTGEGIDTLLEALDLYLP 184 (185)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 99886999678999798999999997785