HHsearch alignment for GI: 254780809 and conserved domain: pfam00025
>pfam00025 Arf ADP-ribosylation factor family. Pfam combines a number of different Prosite families together
Probab=99.66 E-value=4.3e-16 Score=131.47 Aligned_cols=134 Identities=21% Similarity=0.295 Sum_probs=97.2
Q ss_pred HHHCCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHH
Q ss_conf 32023024311466318889999855200023454687211000124568358999508100024103566667888998
Q gi|254780809|r 216 IRNGYKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGIKRTFLE 295 (440)
Q Consensus 216 l~~g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~ 295 (440)
T Consensus 11 ~~k~~Ki~llG~~~vGKTsll~~~~~~~~~~~--~p--Tig~~~~~v~~~~~~~~iwDt~Gqe~~~--------~~~~~y 78 (174)
T pfam00025 11 LNKEMRILILGLDNAGKTTILYKLKLGEIVTT--IP--TIGFNVETVTYKNVKFTVWDVGGQESLR--------PLWRNY 78 (174)
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHCCCCCCC--CC--CCCCEEEEEEECCEEEEEEECCCCCCCC--------HHHHHH
T ss_conf 89666999999999988999999954998874--47--4682389999899999998279870232--------679988
Q ss_pred HHHHCCEEECCCCCCHHHHH-------------HHCCCCCCCCCCCCCCCCCCCHH----------------HHHHHHHH
Q ss_conf 50301102013589856634-------------31289853222233344654200----------------00013333
Q gi|254780809|r 296 VENADLILLLKEINSKKEIS-------------FPKNIDFIFIGTKSDLYSTYTEE----------------YDHLISSF 346 (440)
Q Consensus 296 i~~aDlil~v~D~~~~~~~~-------------~~~~~~~i~V~NK~Dl~~~~~~~----------------~~~~ISak 346 (440)
T Consensus 79 ~~~a~~ii~V~D~t~~~s~~~~~~~l~~~l~~~~~~~~piliv~NK~DL~~~~~~~ei~~~~~~~~~~~~~~~~~~~SAk 158 (174)
T pfam00025 79 FPNTDAVIFVVDSADRDRIEEAKEELHALLNEEELADAPLLILANKQDLPGAMSEAEIRELLGLHELKSRPWEIQGCSAV 158 (174)
T ss_pred HCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC
T ss_conf 41782689998678678799999999998754235897089987256676789999999999786441799689999886
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 232358999999999
Q gi|254780809|r 347 TGEGLEELINKIKSI 361 (440)
Q Consensus 347 tg~Gi~~L~~~I~~~ 361 (440)
T Consensus 159 tG~gI~e~f~~L~~~ 173 (174)
T pfam00025 159 TGEGLDEGLDWLSNY 173 (174)
T ss_pred CCCCHHHHHHHHHHH
T ss_conf 795989999999953