HHsearch alignment for GI: 254780809 and conserved domain: pfam00350
>pfam00350 Dynamin_N Dynamin family.
Probab=99.01 E-value=7.5e-10 Score=88.16 Aligned_cols=103 Identities=31% Similarity=0.303 Sum_probs=67.2
Q ss_pred EEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCC---------------------------------------
Q ss_conf 24311466318889999855200023454687211000124---------------------------------------
Q gi|254780809|r 222 IVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDL--------------------------------------- 262 (440)
Q Consensus 222 v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~--------------------------------------- 262 (440)
T Consensus 1 ivvvG~~ssGKSSliNALlG~~ilP~~~~~-~T~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 79 (168)
T pfam00350 1 IAVVGDQSAGKSSVLNALLGRDILPRGPGP-TTRRPLVLRLGEEPGAIPGAVKVEYKDGLKKFEDFSELREEIEDETDKI 79 (168)
T ss_pred CEEECCCCCCHHHHHHHHHCCCCCCCCCCC-CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 989917889899999999788736889976-5167189995788765554121112333001488999999999755431
Q ss_pred -----------------CCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHH---HHHH------
Q ss_conf -----------------56835899950810002410356666788899850301102013589856---6343------
Q gi|254780809|r 263 -----------------DLEGYLVKISDTAGIRETDDIVEKEGIKRTFLEVENADLILLLKEINSKK---EISF------ 316 (440)
Q Consensus 263 -----------------~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~aDlil~v~D~~~~~---~~~~------ 316 (440)
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~lvDtPGl~s~~~~~----~~~t~~~i~~~d~il~V~~a~~~~~~~~~~~l~~~~d 155 (168)
T pfam00350 80 SGTGKGISSEPIILEILSPLVPGLTLVDTPGLDSVAVGD----QDLTEEYIKPADIILAVVDANHDLSTSEALFLAREVD 155 (168)
T ss_pred CCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCC----HHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHC
T ss_conf 345778777108998368888881898279865444336----9999999853866999984695166619999999739
Q ss_pred HCCCCCCCCCCCC
Q ss_conf 1289853222233
Q gi|254780809|r 317 PKNIDFIFIGTKS 329 (440)
Q Consensus 317 ~~~~~~i~V~NK~ 329 (440)
T Consensus 156 ~~~~r~i~V~tk~ 168 (168)
T pfam00350 156 PNGKRTIGVLTKD 168 (168)
T ss_pred CCCCEEEEEECCC
T ss_conf 9998389998188