HHsearch alignment for GI: 254780809 and conserved domain: pfam03029
>pfam03029 ATP_bind_1 Conserved hypothetical ATP binding protein. Members of this family are found in a range of archaea and eukaryotes and have hypothesized ATP binding activity.
Probab=98.05 E-value=1e-05 Score=59.47 Aligned_cols=106 Identities=22% Similarity=0.280 Sum_probs=59.2
Q ss_pred EECCCCCCHHHHHHHHHC------CHHCCCCCCCCC----------CEEEC-----------------------------
Q ss_conf 311466318889999855------200023454687----------21100-----------------------------
Q gi|254780809|r 224 ILGHSNAGKSSLFNALAK------KDVAIVTDIPGT----------TRDVL----------------------------- 258 (440)
Q Consensus 224 i~G~pN~GKSSL~N~L~~------~~~aIVs~~~GT----------TRD~i----------------------------- 258 (440)
T Consensus 1 ViGpaGSGKTT~~~~l~~~l~~~~r~~~vvNLDPA~e~~pY~~~iDIrd~i~~~dvM~~~~LGPNGali~~me~l~~~~d 80 (234)
T pfam03029 1 VVGGAGSGKTTFVGALSEILPLRGRSVYVVNLDPAAENLPYEADIDIRELITVADVMEDYGLGPNGALTVAMDFGRITLD 80 (234)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 98989898899999999999977997599978986658999877717874679999998298973899999999999999
Q ss_pred --CCCCCCCCEEEEEEECCHHCC--CCHHHHHHHHHHHHHHHHHHCCEEECCCCC---CHHHH----------HHHCCCC
Q ss_conf --012456835899950810002--410356666788899850301102013589---85663----------4312898
Q gi|254780809|r 259 --TIDLDLEGYLVKISDTAGIRE--TDDIVEKEGIKRTFLEVENADLILLLKEIN---SKKEI----------SFPKNID 321 (440)
Q Consensus 259 --~~~~~i~g~~~~l~DTaGir~--t~d~IE~~GI~ra~~~i~~aDlil~v~D~~---~~~~~----------~~~~~~~ 321 (440)
T Consensus 81 ~l~~~l~~~-~~y~l~DtPGQiElf~~~~~~~~i~~~-L~--~~~~~~v~l~D~~~~~d~~~fis~~L~a~s~m~~l~lP 156 (234)
T pfam03029 81 WLLEELEYE-DDYYLFDTPGQIELFTHWDSLARGVEA-LE--ASRLGAVYLVDTRRLTDPIDFFSGLLYALSIMLRLGLP 156 (234)
T ss_pred HHHHHHCCC-CCEEEEECCCCEEEEECCHHHHHHHHH-HH--CCCEEEEEEECHHHHCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999985255-776998369835765400269999999-71--28738999842577468888999999999999974899
Q ss_pred CCCCCCCCCCCC
Q ss_conf 532222333446
Q gi|254780809|r 322 FIFIGTKSDLYS 333 (440)
Q Consensus 322 ~i~V~NK~Dl~~ 333 (440)
T Consensus 157 ~vnvlsK~Dl~~ 168 (234)
T pfam03029 157 FVVALNKFDLLS 168 (234)
T ss_pred EEEEECCHHCCC
T ss_conf 443100041354