HHsearch alignment for GI: 254780809 and conserved domain: pfam09439

>pfam09439 SRPRB Signal recognition particle receptor beta subunit. The beta subunit of the signal recognition particle receptor (SRP) is a transmembrane GTPase which anchors the alpha subunit to the endoplasmic reticulum membrane.
Probab=98.69  E-value=6.1e-08  Score=74.87  Aligned_cols=111  Identities=19%  Similarity=0.312  Sum_probs=69.4

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHCCHH-CCCCCC-CCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             23024311466318889999855200-023454-6872110001245683589995081000241035666678889985
Q gi|254780809|r  219 GYKIVILGHSNAGKSSLFNALAKKDV-AIVTDI-PGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGIKRTFLEV  296 (440)
Q Consensus       219 g~~v~i~G~pN~GKSSL~N~L~~~~~-aIVs~~-~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~i  296 (440)
T Consensus         3 ~ptvLllGl~~sGKT~Lf~~L~~~~~~~T~tS~~~n~~----~~~~~~~~~~~~lvD~PGh~klR~~-----~~~~~~~~   73 (181)
T pfam09439         3 QPAVIIAGLCDSGKTSLFTLLTTGSVRKTVTSQEPSAA----YKYMNNKGNSLTLIDFPGHVKLRYK-----LLETLKDS   73 (181)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHCCCCCCEECCCCCCCE----EEEECCCCCEEEEEECCCCHHHHHH-----HHHHHHHH
T ss_conf             88699986899989999999975994875888678640----6875168966899988996899999-----99864300


Q ss_pred             HHHCCEEECCCCC-CHHHH--------H-------HHCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             0301102013589-85663--------4-------31289853222233344654200
Q gi|254780809|r  297 ENADLILLLKEIN-SKKEI--------S-------FPKNIDFIFIGTKSDLYSTYTEE  338 (440)
Q Consensus       297 ~~aDlil~v~D~~-~~~~~--------~-------~~~~~~~i~V~NK~Dl~~~~~~~  338 (440)
T Consensus        74 ~~~~gIVfVVDS~~~~~~l~~~Ae~Ly~iL~~~~~~~~~vPvLI~cNKqDl~~A~~~~  131 (181)
T pfam09439        74 SSLRGLVFVVDSTAFPKEVTDTAEFLYDILSITELLKNGIDILIACNKQEIFTARPPK  131 (181)
T ss_pred             CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEEECCCCCCCCCHH
T ss_conf             2644999999786656679999999999984454336899789997374633577999