HHsearch alignment for GI: 254780809 and conserved domain: smart00174
>smart00174 RHO Rho (Ras homology) subfamily of Ras-like small GTPases. Members of this subfamily of Ras-like small GTPases include Cdc42 and Rac, as well as Rho isoforms.
Probab=99.30 E-value=1.2e-11 Score=100.50 Aligned_cols=131 Identities=23% Similarity=0.317 Sum_probs=89.7
Q ss_pred EEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCE--EEEEEECCHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 2431146631888999985520002345468721100012456835--89995081000241035666678889985030
Q gi|254780809|r 222 IVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGY--LVKISDTAGIRETDDIVEKEGIKRTFLEVENA 299 (440)
Q Consensus 222 v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~--~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~a 299 (440)
T Consensus 1 ivllGd~~VGKTsli~r~~~~~f--~~~y~~Ti~~~~~~~~~~~~~~~~l~i~DtaG~e~~~~------l--~~~~~~~a 70 (174)
T smart00174 1 LVVVGDGAVGKTCLLISYTTNAF--PEDYVPTVFENYSADVEVDGKPVELGLWDTAGQEDYDR------L--RPLSYPDT 70 (174)
T ss_pred EEEECCCCCCHHHHHHHHHHCCC--CCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCCCCCC------C--CHHHCCCC
T ss_conf 59989789759999999953989--99857850578999999999999999994898703454------5--00110488
Q ss_pred CCEEECCCCCCHHHHHH------------HCCCCCCCCCCCCCCCCCCC--------------H--------H----HHH
Q ss_conf 11020135898566343------------12898532222333446542--------------0--------0----000
Q gi|254780809|r 300 DLILLLKEINSKKEISF------------PKNIDFIFIGTKSDLYSTYT--------------E--------E----YDH 341 (440)
Q Consensus 300 Dlil~v~D~~~~~~~~~------------~~~~~~i~V~NK~Dl~~~~~--------------~--------~----~~~ 341 (440)
T Consensus 71 ~~~ilvydvt~~~Sf~~~~~~w~~~i~~~~~~~piilVgnK~DL~~~~~~~~~~~~~~~~~Vs~~~~~~~a~~~~~~~y~ 150 (174)
T smart00174 71 DVFLICFSVDSPASFENVKEKWYPEVKHFCPNTPIILVGTKLDLREDKSTLRELSKQKQEPVTYEQGEALAKRIGAVKYL 150 (174)
T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEE
T ss_conf 68999975898789999999899999986889869999875425012333545533146500299999999983997899
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 133332323589999999996
Q gi|254780809|r 342 LISSFTGEGLEELINKIKSIL 362 (440)
Q Consensus 342 ~ISaktg~Gi~~L~~~I~~~l 362 (440)
T Consensus 151 EtSAk~g~nV~e~F~~l~r~~ 171 (174)
T smart00174 151 ECSALTQEGVREVFEEAIRAA 171 (174)
T ss_pred EECCCCCCCHHHHHHHHHHHH
T ss_conf 964588949899999999997