HHsearch alignment for GI: 254780810 and conserved domain: COG0464
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].
Probab=94.20 E-value=0.25 Score=27.91 Aligned_cols=74 Identities=22% Similarity=0.268 Sum_probs=40.4
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 12220487787899999999998611886469999508787899999984034278236678888999999999999999
Q gi|254780810|r 176 RSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFDESAARHVQVAEMVIAKAKC 255 (423)
Q Consensus 176 r~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~~~~~~~~vv~st~d~~~~~~~~~a~~a~~~a~~ 255 (423)
T Consensus 278 giLl~GpPGtGKT~lAkava~~~~~~------fi~v~~~--~l~sk~vGe--------------------sek~ir~~F~ 329 (494)
T COG0464 278 GVLLYGPPGTGKTLLAKAVALESRSR------FISVKGS--ELLSKWVGE--------------------SEKNIRELFE 329 (494)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCC------EEEECCH--HHHHHHHHH--------------------HHHHHHHHHH
T ss_conf 69998899975899999987544982------4884335--554077659--------------------9999999999
Q ss_pred HHHCCCCEEEEEECHHHHHHHH
Q ss_conf 9977992899981638987762
Q gi|254780810|r 256 LVEYGLDVVILLDSITRLCRAY 277 (423)
Q Consensus 256 ~~e~G~dVll~~DslTR~ArA~ 277 (423)
T Consensus 330 ~A~~~~p~iifiDEiDs~~~~r 351 (494)
T COG0464 330 KARKLAPSIIFIDEIDSLASGR 351 (494)
T ss_pred HHHHCCCCEEEHHHHHHHHCCC
T ss_conf 9996699889748866674128