HHsearch alignment for GI: 254780810 and conserved domain: COG0645

Probab=92.01  E-value=0.69  Score=24.96  Aligned_cols=74  Identities=26%  Similarity=0.331  Sum_probs=44.6

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEC----CCCCCHHHHHHHHHHHHHH
Q ss_conf             222048778789999999999861188646999950878789999998403427823----6678888999999999999
Q gi|254780810|r  177 SLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISS----TFDESAARHVQVAEMVIAK  252 (423)
Q Consensus       177 ~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~~~~~~~~vv~s----t~d~~~~~~~~~a~~a~~~  252 (423)
T Consensus         4 ~l~~Gl~GsGKstlA~~l~~~lgA-------~~l----rsD~irk~---L~g-~p~~~r~~~g~ys~~~~~~vy~~l~~~   68 (170)
T COG0645           4 VLVGGLPGSGKSTLARGLAELLGA-------IRL----RSDVIRKR---LFG-VPEETRGPAGLYSPAATAAVYDELLGR   68 (170)
T ss_pred             EEEECCCCCCHHHHHHHHHHHCCC-------EEE----EHHHHHHH---HCC-CCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             997258886586887898853486-------687----41789987---238-861014887887678899999999988


Q ss_pred             HHHHHHCCCCEEE
Q ss_conf             9999977992899
Q gi|254780810|r  253 AKCLVEYGLDVVI  265 (423)
Q Consensus       253 a~~~~e~G~dVll  265 (423)
T Consensus        69 A~l~l~~G~~VVl   81 (170)
T COG0645          69 AELLLSSGHSVVL   81 (170)
T ss_pred             HHHHHHCCCCEEE
T ss_conf             9999967991898