HHsearch alignment for GI: 254780810 and conserved domain: PRK03992

>PRK03992 proteasome-activating nucleotidase; Provisional.
Probab=97.17  E-value=0.0068  Score=38.18  Aligned_cols=134  Identities=22%  Similarity=0.257  Sum_probs=67.6

Q ss_pred             EEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEEC----CCCCCCCCCEEECCCCCCCH
Q ss_conf             89999985404770267504548666655604601000012212598799988624----68887630002222556887
Q gi|254780810|r   52 IIGEGVIEVLQDGFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAP----REGERYFALLKVNAINFDVP  127 (423)
Q Consensus        52 ~~~eGvLEIl~dGyGFLR~~~~~yl~~~~DiyVs~slir~f~Lr~GD~V~g~~r~~----~~~~~~~~L~rV~~vnG~~~  127 (423)
T Consensus        54 ~~vg~~~~~~~~~~~iv~~~-----~g~~~~v~~~~~~~~~~l~pg~~V~l~~~~~~i~~~l~~~~d~~v~~m~v~e~P~  128 (390)
T PRK03992         54 LIVATVLEVLDDGRVVVKSS-----TGPQFVVTVSSFVDRDKLKPGARVALNQQTLAIVEVLPSEKDPRVRAMEVIESPD  128 (390)
T ss_pred             CEEEEEEEEECCCEEEEEEC-----CCCEEEEECCCCCCHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf             48999999837974999978-----9987999657876888879999899853530305646888786211042147999


Q ss_pred             HHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CCEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf             88512443000200011223432477865321368889988655102--312220487787899999999998611
Q gi|254780810|r  128 ERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKG--QRSLIVAPPRTGKTILLQNIAHSIKKN  201 (423)
Q Consensus       128 d~~~~~~~f~~l~p~~p~~~i~le~~~~~p~~~~~~~id~~~pig~g--qr~~i~~~~~~gkt~ll~~ia~~~~~~  201 (423)
T Consensus       129 v~~~dIGGl~~~k------~el-----~E~velPl~~pe~f~~~Gi~pPkGvLLyGPPGtGKTllAkAvA~e~~~~  193 (390)
T PRK03992        129 VTYEDIGGLDEQI------REV-----REAVELPLKNPELFEEVGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAT  193 (390)
T ss_pred             CCHHHHCCHHHHH------HHH-----HHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf             9846614989999------999-----9999998659899997699999727868989997899999999874888