HHsearch alignment for GI: 254780810 and conserved domain: PRK04040

Probab=93.22  E-value=0.45  Score=26.18  Aligned_cols=82  Identities=16%  Similarity=0.243  Sum_probs=45.1

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEECCCC----CCHHHHHHHHHHH
Q ss_conf             231222048778789999999999861188646999950878789999998403427823667----8888999999999
Q gi|254780810|r  174 GQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFD----ESAARHVQVAEMV  249 (423)
Q Consensus       174 gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~~~~~~~~vv~st~d----~~~~~~~~~a~~a  249 (423)
T Consensus         2 ~k~VvvtGiPGvGKTTv~~~~~~~l~~~~~----~v-n~G~~---M~e~---A~~~glv~~RDemRkL~~~~q~~lQ~--   68 (189)
T PRK04040          2 MKVVVVTGVPGVGKTTVLNKALEKLKEDYK----IV-NFGDV---MLEV---AKEEGLVEHRDEMRKLPLEEQKELQR--   68 (189)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHCCCCE----EE-EHHHH---HHHH---HHHCCCCCCHHHHCCCCHHHHHHHHH--
T ss_conf             418999758988789999999997235875----98-67799---9999---99817734778874799999999999--


Q ss_pred             HHHHHHHHHCCCCEEEEEEC
Q ss_conf             99999999779928999816
Q gi|254780810|r  250 IAKAKCLVEYGLDVVILLDS  269 (423)
Q Consensus       250 ~~~a~~~~e~G~dVll~~Ds  269 (423)
T Consensus        69 -~Aa~~I~~~~~~~~ViIDT   87 (189)
T PRK04040         69 -EAAERIAEMAGEGPVIVDT   87 (189)
T ss_pred             -HHHHHHHHHCCCCCEEEEC
T ss_conf             -9999999835787289944