HHsearch alignment for GI: 254780810 and conserved domain: PRK04192
>PRK04192 V-type ATP synthase subunit A; Provisional.
Probab=100.00 E-value=0 Score=434.04 Aligned_cols=324 Identities=19% Similarity=0.161 Sum_probs=278.4
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHCCC-----------CH-------
Q ss_conf 666655604601000012212598799988624688876300022225568878851244-----------30-------
Q gi|254780810|r 75 YLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVNAINFDVPERVRNKI-----------HF------- 136 (423)
Q Consensus 75 yl~~~~DiyVs~slir~f~Lr~GD~V~g~~r~~~~~~~~~~L~rV~~vnG~~~d~~~~~~-----------~f------- 136 (423)
T Consensus 40 VI~i~gd~a~iQVyE~T~Gl~~G~~V~~TG~pLsV~LGpgLLGrIfDGiqrPLd~i~~~~g~fi~rG~~~~~Ldr~~~w~ 119 (585)
T PRK04192 40 IIRVRGDEASIQVYEETSGIKPGEPVEFTGEPLSVELGPGLLGSIYDGIQRPLDELAEKSGDFLKRGVYVPALDREKKWH 119 (585)
T ss_pred EEEEECCEEEEEECCCCCCCCCCCEEEECCCCEEEEECHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99994998999966688899998988847994498867625526247577863345543266544788788877444453
Q ss_pred ----------------------------------------------------------------------HHCCCCCCCC
Q ss_conf ----------------------------------------------------------------------0020001122
Q gi|254780810|r 137 ----------------------------------------------------------------------DNLTPLYPDK 146 (423)
Q Consensus 137 ----------------------------------------------------------------------~~l~p~~p~~ 146 (423)
T Consensus 120 f~P~~~~Gd~v~~Gdilg~V~Et~~i~H~imvPp~~~g~v~~i~~~G~ytv~d~ia~v~~~~G~~~~~~m~q~WPVR~pr 199 (585)
T PRK04192 120 FKPTVKVGDKVVAGDVLGTVQETGSIEHKIMVPPGVSGTIKEIASEGDYTVDDTIAVVEDEDGKGKELTMMQKWPVRRPR 199 (585)
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 11113558741578657885046653341106988873389970588504301699986267874343311027666889
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH-
Q ss_conf 3432477865321368889988655102312220487787899999999998611886469999508787899999984-
Q gi|254780810|r 147 RFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRS- 225 (423)
Q Consensus 147 ~i~le~~~~~p~~~~~~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~~~~- 225 (423)
T Consensus 200 P~~~r~~p~~PL~TG~RvID~lfpi~rGgt~~IpGgfG~GKTvl~~~lak~s~aD----ivVyvgcGERgnEm~evl~eF 275 (585)
T PRK04192 200 PYKEKLPPVEPLITGQRVIDTFFPVAKGGTAAIPGPFGSGKTVTQHQLAKWADAD----IVIYVGCGERGNEMTEVLEEF 275 (585)
T ss_pred CHHHCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCC----EEEEEEECCCHHHHHHHHHHH
T ss_conf 6233058665410373330023320268623212666666466799997426899----899997325408699999987
Q ss_pred -------------HCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf -------------0342782366788889999999999999999977992899981638987762001366777677752
Q gi|254780810|r 226 -------------VQGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGV 292 (423)
Q Consensus 226 -------------~~~~vv~st~d~~~~~~~~~a~~a~~~a~~~~e~G~dVll~~DslTR~ArA~~~~~~~~g~~~~gg~ 292 (423)
T Consensus 276 pel~Dp~tG~~lm~RTVliaNTSnmPvaaReaSiytgiTiAEYfRDmG~~VllmaDStSRwAeAlREIS~rleE~Pg~eG 355 (585)
T PRK04192 276 PELKDPKTGRPLMERTVLIANTSNMPVAAREASIYTGITIAEYYRDMGYDVLLMADSTSRWAEALREISGRLEEMPGEEG 355 (585)
T ss_pred HHHCCCCCCCHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 76037546701203089999999985788765156788899999976970899975668999998898786436985346
Q ss_pred CHHHH-HHCHHHHHCCCCCC----CCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCC
Q ss_conf 02466-50468752257777----77850012112012676554138898852266078980878847999740533542
Q gi|254780810|r 293 DANAL-QRPKRFFGAARNIK----EGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSG 367 (423)
Q Consensus 293 ~~~~l-~~~~~~~~~ar~~~----~~Gs~T~~~t~lvetg~~~d~~i~~~~~~~~d~~i~L~r~la~~~~~PAId~~~S~ 367 (423)
T Consensus 356 YPaYL~SrLA~fYERAGrV~~~~~~~GSvT~igaVSpp-GgDfsePVT~~Tl~~v~~fw~Ld~~lA~~rhfPainwl~Sy 434 (585)
T PRK04192 356 YPAYLASRLAEFYERAGRVKTLGGSEGSVTIIGAVSPP-GGDFSEPVTQNTLRIVKVFWALDADLAYRRHYPAINWLTSY 434 (585)
T ss_pred CCCHHHHHHHHHHHHCCEEECCCCCCCCEEEEEEECCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf 78238989999987424555058997627998886589-98867735788898887887513767755668866702436
Q ss_pred CCCHHHC-------CCHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 2101551-------99999999999999961269378999999
Q gi|254780810|r 368 TRKEDLL-------VERQDLQKVFMLRRIVSSMNSSDAIEFLI 403 (423)
Q Consensus 368 sR~~~~l-------~~~~~~~~~~~~r~~l~~~~~~e~~~~l~ 403 (423)
T Consensus 435 S~y~~~~~~~~~~~~~~~~~~~r~~~~~iL~~e~~l~eiv~lv 477 (585)
T PRK04192 435 SLYLDDVADWWEENVSPDWRELRDEAMSLLQREAELQEIVRLV 477 (585)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7788889999987418159999999999987268999999864