HHsearch alignment for GI: 254780810 and conserved domain: PRK04195

>PRK04195 replication factor C large subunit; Provisional.
Probab=93.37  E-value=0.15  Score=29.40  Aligned_cols=38  Identities=34%  Similarity=0.513  Sum_probs=28.0

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEE-ECCCCHHHH
Q ss_conf             2220487787899999999998611886469999-508787899
Q gi|254780810|r  177 SLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVL-LIDERPEEV  219 (423)
Q Consensus       177 ~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~-ligEr~~ev  219 (423)
T Consensus        43 lLL~GPpGvGKTT~a~~lAk~~g~~-----viElNASD~R~~~~   81 (403)
T PRK04195         43 LLLYGPPGVGKTSLAHALANDYGWE-----VIELNASDQRTKDV   81 (403)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCC-----EEEECCCCCCCHHH
T ss_conf             9988939987999999999984998-----59977101147899