HHsearch alignment for GI: 254780810 and conserved domain: PRK04196
>PRK04196 V-type ATP synthase subunit B; Provisional.
Probab=100.00 E-value=0 Score=517.28 Aligned_cols=329 Identities=16% Similarity=0.108 Sum_probs=300.9
Q ss_pred CCCCCCCCCEEECCCCCCCCCCC-CCEEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCC
Q ss_conf 86666556046010000122125-98799988624688876300022225568878851244300020001122343247
Q gi|254780810|r 74 NYLAGPDDIYVSPSQIKSFSLKT-GDTVEGSIRAPREGERYFALLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMEL 152 (423)
Q Consensus 74 ~yl~~~~DiyVs~slir~f~Lr~-GD~V~g~~r~~~~~~~~~~L~rV~~vnG~~~d~~~~~~~f~~l~p~~p~~~i~le~ 152 (423)
T Consensus 42 eVi~~~~d~~~iqv~e~t~Gl~~~g~~V~~tG~plsV~vG~~lLGRV~DglGrPlDg~~~i~~~~~~~i~g~~~np~~R~ 121 (460)
T PRK04196 42 QVLEVSGDKAVVQVFEGTTGLNLKGTKVRFTGETLELPVSEDMLGRIFDGLGRPIDGGPEIIPEKRLDINGAPINPVARE 121 (460)
T ss_pred EEEEEECCEEEEEECCCCCCCCCCCCEEEECCCCEEEEECHHHHCCEECCCCCCCCCCCCCCCCCEEECCCCCCCCHHHC
T ss_conf 99998699799999159888785997899479952887187772798477886368899888773412588998925526
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHC--CCCCEEEEEECCCCHHHHHHHHHHH----
Q ss_conf 7865321368889988655102312220487787899999999998611--8864699995087878999999840----
Q gi|254780810|r 153 NNPENKDISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKN--HPECYLIVLLIDERPEEVTDMQRSV---- 226 (423)
Q Consensus 153 ~~~~p~~~~~~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~--~~~v~~i~~ligEr~~ev~e~~~~~---- 226 (423)
T Consensus 122 ~~~e~l~TGI~~ID~l~pl~rGQr~~If~gsGvgks~l~~~i~~qa~~~~~~~~~~vV~~~iGeR~~E~~e~~~~~~~~g 201 (460)
T PRK04196 122 YPEEFIQTGISAIDGLNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLGSEEKFAVVFAAMGITFEEANFFMDEFEETG 201 (460)
T ss_pred CCCCEECCCCEEEECCCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEECHHHHHHHHHHHHCC
T ss_conf 88846137967961643322475765533899881169999999877505788815999732076068999999887448
Q ss_pred ---CCEEEECCCCCCHHHHHHHHHHHHHHHHHHH-HCCCCEEEEEECHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHCH
Q ss_conf ---3427823667888899999999999999999-77992899981638987762001366777677-752024665046
Q gi|254780810|r 227 ---QGEVISSTFDESAARHVQVAEMVIAKAKCLV-EYGLDVVILLDSITRLCRAYNVLMPSSGKILT-GGVDANALQRPK 301 (423)
Q Consensus 227 ---~~~vv~st~d~~~~~~~~~a~~a~~~a~~~~-e~G~dVll~~DslTR~ArA~~~~~~~~g~~~~-gg~~~~~l~~~~ 301 (423)
T Consensus 202 ~m~rtvlv~~ts~~p~~~R~~~~~~a~tiAEyfr~d~G~~VL~~~dd~tr~A~A~REis~~lge~P~~~GYP~~l~s~la 281 (460)
T PRK04196 202 ALERSVLFLNLADDPAIERILTPRMALTTAEYLAFEKGMHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLA 281 (460)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf 63200475135889889988887666578999998569957999758078888766888754799987776862688868
Q ss_pred HHHHCCCCCC-CCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCHHHCCC----
Q ss_conf 8752257777-77850012112012676554138898852266078980878847999740533542210155199----
Q gi|254780810|r 302 RFFGAARNIK-EGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKEDLLVE---- 376 (423)
Q Consensus 302 ~~~~~ar~~~-~~Gs~T~~~t~lvetg~~~d~~i~~~~~~~~d~~i~L~r~la~~~~~PAId~~~S~sR~~~~l~~---- 376 (423)
T Consensus 282 ~l~ERAG~~~~~~GSIT~i~~V~~p-gdD~t~Pi~~~t~~i~dg~i~L~r~La~~g~yPaId~l~S~SR~~~~~ig~~~~ 360 (460)
T PRK04196 282 TLYERAGRIKGKKGSITQIPILTMP-EDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRLMKDGIGEGKT 360 (460)
T ss_pred HHHHHCCCCCCCCCCEEEEEEEECC-CCCCCCCHHHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCC
T ss_conf 8887235557898326999999767-987666467767644043899838999679988788765501102033565521
Q ss_pred -HHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf -999999999999961269378999999
Q gi|254780810|r 377 -RQDLQKVFMLRRIVSSMNSSDAIEFLI 403 (423)
Q Consensus 377 -~~~~~~~~~~r~~l~~~~~~e~~~~l~ 403 (423)
T Consensus 361 ~~~h~~va~~~~~~la~~~el~~i~~lv 388 (460)
T PRK04196 361 REDHADVSNQLYAAYARGKDLRELAAIV 388 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6689999999999999788899999984