HHsearch alignment for GI: 254780810 and conserved domain: PRK06315

>PRK06315 type III secretion system ATPase; Provisional.
Probab=100.00  E-value=0  Score=599.47  Aligned_cols=325  Identities=19%  Similarity=0.194  Sum_probs=296.5

Q ss_pred             CCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCHHHH--HCCCCH-HHCCCCCCCCCCCC
Q ss_conf             866665560460100001221259879998862468887630002222556887885--124430-00200011223432
Q gi|254780810|r   74 NYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVNAINFDVPERV--RNKIHF-DNLTPLYPDKRFNM  150 (423)
Q Consensus        74 ~yl~~~~DiyVs~slir~f~Lr~GD~V~g~~r~~~~~~~~~~L~rV~~vnG~~~d~~--~~~~~f-~~l~p~~p~~~i~l  150 (423)
T Consensus        61 EVVgf~~~~~~l~p~~~~~Gi~~G~~V~~~g~~~~vpvg~~lLGRViD~~G~PiDg~~~gp~~~~~~~~pi~~~~p~p~~  140 (442)
T PRK06315         61 EVVGFTQNFVFLSPLGELTGVSPSSEVIPTGLPLHIRAGNGLLGRVLNGLGEPIDTETKGPLENVDETYPIFRAPPDPLH  140 (442)
T ss_pred             EEEEECCCEEEEEECCCCCCCCCCCEEEECCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHH
T ss_conf             99998499799998778767899999996899877872715137888888776678777887677631132478969343


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH----
Q ss_conf             4778653213688899886551023122204877878999999999986118864699995087878999999840----
Q gi|254780810|r  151 ELNNPENKDISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSV----  226 (423)
Q Consensus       151 e~~~~~p~~~~~~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~~~~~----  226 (423)
T Consensus       141 R~~i~epl~TGIraID~llpig~GQR~gIfagsGvGKs~Ll~~i~~~~~~--ad-v~V~~lIGeRgrEv~efie~~~~~~  217 (442)
T PRK06315        141 RAKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSSLLGMIARNAEE--AD-VNVIALIGERGREVREFIEGDLGEE  217 (442)
T ss_pred             HCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCC--CC-CEEEEEECCCCHHHHHHHHHHHCCC
T ss_conf             07878753368530011277023777640389999888999999974403--89-3499995511379999999752014


Q ss_pred             ---CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHCHH
Q ss_conf             ---342782366788889999999999999999977992899981638987762001366777677-7520246650468
Q gi|254780810|r  227 ---QGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILT-GGVDANALQRPKR  302 (423)
Q Consensus       227 ---~~~vv~st~d~~~~~~~~~a~~a~~~a~~~~e~G~dVll~~DslTR~ArA~~~~~~~~g~~~~-gg~~~~~l~~~~~  302 (423)
T Consensus       218 ~l~rsvvV~atsd~p~~~R~~a~~~A~aiAEyFrd~G~~VLl~~DslTR~A~A~REi~l~~gepP~~~GYppsvf~~l~~  297 (442)
T PRK06315        218 GMKRSVIVVSTSDQSSQLRLNAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPK  297 (442)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf             52133999617999878875558877789999986899489994370288889999997558999877868339988788


Q ss_pred             HHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHH
Q ss_conf             75225777777850012112012676554138898852266078980878847999740533542210155199999999
Q gi|254780810|r  303 FFGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKEDLLVERQDLQK  382 (423)
Q Consensus       303 ~~~~ar~~~~~Gs~T~~~t~lvetg~~~d~~i~~~~~~~~d~~i~L~r~la~~~~~PAId~~~S~sR~~~~l~~~~~~~~  382 (423)
T Consensus       298 l~ERag~~~-~GSITa~~tVl~~-gdD~~dPi~d~~~~ilDGhivLsr~la~~g~yPAIDvl~S~SR~~~~v~~~~h~~~  375 (442)
T PRK06315        298 LLERAGASD-KGTITAFYTVLVA-GDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLTAIVPEEQRRI  375 (442)
T ss_pred             HHHHCCCCC-CCCEEEEEEEECC-CCCCCCCCHHHHHHHCCCEEEECHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHH
T ss_conf             887224889-9745653346515-88767873677787606169985879866999971875045336611057999999


Q ss_pred             HHHHHHHHHCCCCHHHHHHHH
Q ss_conf             999999961269378999999
Q gi|254780810|r  383 VFMLRRIVSSMNSSDAIEFLI  403 (423)
Q Consensus       383 ~~~~r~~l~~~~~~e~~~~l~  403 (423)
T Consensus       376 a~~~r~~la~y~e~edli~iG  396 (442)
T PRK06315        376 IGKAREVLAKYKANEMLIRIG  396 (442)
T ss_pred             HHHHHHHHHHHHHHHHHHHHC
T ss_conf             999999999889999999962