HHsearch alignment for GI: 254780810 and conserved domain: PRK06820

>PRK06820 type III secretion system ATPase; Validated.
Probab=100.00  E-value=0  Score=592.71  Aligned_cols=322  Identities=23%  Similarity=0.228  Sum_probs=300.4

Q ss_pred             CCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCC
Q ss_conf             86666556046010000122125987999886246888763000222255688788512443000200011223432477
Q gi|254780810|r   74 NYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELN  153 (423)
Q Consensus        74 ~yl~~~~DiyVs~slir~f~Lr~GD~V~g~~r~~~~~~~~~~L~rV~~vnG~~~d~~~~~~~f~~l~p~~p~~~i~le~~  153 (423)
T Consensus        64 eVv~~~~~~v~l~~~~~~~Gi~~G~~V~~tG~~l~V~VG~~lLGRVvD~lG~PiDgg~~-~~~~~~pi~~~~p~p~~R~~  142 (445)
T PRK06820         64 EVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPP-LTGQWRELDCPPPSPLTRQP  142 (445)
T ss_pred             EEEEEECCEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCCCCCEECCCCCCCCCCCC-CCCCEEECCCCCCCCHHCCC
T ss_conf             99998789799998878878899999997999608872824027870688753189988-77743203589968320268


Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH-------
Q ss_conf             8653213688899886551023122204877878999999999986118864699995087878999999840-------
Q gi|254780810|r  154 NPENKDISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSV-------  226 (423)
Q Consensus       154 ~~~p~~~~~~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~~~~~-------  226 (423)
T Consensus       143 i~~pL~TGIraID~l~pigrGQR~gIfgg~GvGKT~Ll~~i~~~~~ad----v~V~~~IGeRgrEv~efie~~~~~~~~~  218 (445)
T PRK06820        143 VEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTLLSMLCADSAAD----VMVLALIGERGREVREFLEQVLTPEARA  218 (445)
T ss_pred             CCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCC----EEEEEEEEEECHHHHHHHHHHHCCCCCC
T ss_conf             785112685466256774478742110689998122344565306788----7999987441289999999864237611


Q ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHCHHHHH
Q ss_conf             342782366788889999999999999999977992899981638987762001366777677-7520246650468752
Q gi|254780810|r  227 QGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILT-GGVDANALQRPKRFFG  305 (423)
Q Consensus       227 ~~~vv~st~d~~~~~~~~~a~~a~~~a~~~~e~G~dVll~~DslTR~ArA~~~~~~~~g~~~~-gg~~~~~l~~~~~~~~  305 (423)
T Consensus       219 rtvvV~atsd~p~~~R~~a~~~a~aiAEyfrd~Gk~VLli~DslTr~A~A~REisl~~gepP~~~gYp~~vf~~l~~L~E  298 (445)
T PRK06820        219 RTVVVVATSDRPALERLKGLSTATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLE  298 (445)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             06999416768989999998761148899986798489984465788889989998647999767778549988888887


Q ss_pred             CCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHH
Q ss_conf             25777777850012112012676554138898852266078980878847999740533542210155199999999999
Q gi|254780810|r  306 AARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKEDLLVERQDLQKVFM  385 (423)
Q Consensus       306 ~ar~~~~~Gs~T~~~t~lvetg~~~d~~i~~~~~~~~d~~i~L~r~la~~~~~PAId~~~S~sR~~~~l~~~~~~~~~~~  385 (423)
T Consensus       299 Rag~~~-~GSITal~~V~~~-~dD~tdpi~d~~~silDG~ivLsr~La~~g~yPAIDvl~SvSRv~~~~~~~~h~~~a~~  376 (445)
T PRK06820        299 RTGNSD-RGSITAFYTVLVE-GDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQK  376 (445)
T ss_pred             HHCCCC-CCCEEEEEEEEEC-CCCCCCCCHHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCHHHCCHHHCCHHHHHHHHH
T ss_conf             304788-9756778889705-88767771676756515389984879866999981874056454622202999999999


Q ss_pred             HHHHHHCCCCHHHHHHH
Q ss_conf             99996126937899999
Q gi|254780810|r  386 LRRIVSSMNSSDAIEFL  402 (423)
Q Consensus       386 ~r~~l~~~~~~e~~~~l  402 (423)
T Consensus       377 ~r~~la~y~e~e~li~~  393 (445)
T PRK06820        377 LRRMLACYQEIELLVQI  393 (445)
T ss_pred             HHHHHHHHHHHHHHHHH
T ss_conf             99999999999999984