HHsearch alignment for GI: 254780810 and conserved domain: PRK06820
>PRK06820 type III secretion system ATPase; Validated.
Probab=100.00 E-value=0 Score=592.71 Aligned_cols=322 Identities=23% Similarity=0.228 Sum_probs=300.4
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCC
Q ss_conf 86666556046010000122125987999886246888763000222255688788512443000200011223432477
Q gi|254780810|r 74 NYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELN 153 (423)
Q Consensus 74 ~yl~~~~DiyVs~slir~f~Lr~GD~V~g~~r~~~~~~~~~~L~rV~~vnG~~~d~~~~~~~f~~l~p~~p~~~i~le~~ 153 (423)
T Consensus 64 eVv~~~~~~v~l~~~~~~~Gi~~G~~V~~tG~~l~V~VG~~lLGRVvD~lG~PiDgg~~-~~~~~~pi~~~~p~p~~R~~ 142 (445)
T PRK06820 64 EVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPP-LTGQWRELDCPPPSPLTRQP 142 (445)
T ss_pred EEEEEECCEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCCCCCEECCCCCCCCCCCC-CCCCEEECCCCCCCCHHCCC
T ss_conf 99998789799998878878899999997999608872824027870688753189988-77743203589968320268
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH-------
Q ss_conf 8653213688899886551023122204877878999999999986118864699995087878999999840-------
Q gi|254780810|r 154 NPENKDISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSV------- 226 (423)
Q Consensus 154 ~~~p~~~~~~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~~~~~------- 226 (423)
T Consensus 143 i~~pL~TGIraID~l~pigrGQR~gIfgg~GvGKT~Ll~~i~~~~~ad----v~V~~~IGeRgrEv~efie~~~~~~~~~ 218 (445)
T PRK06820 143 VEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTLLSMLCADSAAD----VMVLALIGERGREVREFLEQVLTPEARA 218 (445)
T ss_pred CCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCC----EEEEEEEEEECHHHHHHHHHHHCCCCCC
T ss_conf 785112685466256774478742110689998122344565306788----7999987441289999999864237611
Q ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHCHHHHH
Q ss_conf 342782366788889999999999999999977992899981638987762001366777677-7520246650468752
Q gi|254780810|r 227 QGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILT-GGVDANALQRPKRFFG 305 (423)
Q Consensus 227 ~~~vv~st~d~~~~~~~~~a~~a~~~a~~~~e~G~dVll~~DslTR~ArA~~~~~~~~g~~~~-gg~~~~~l~~~~~~~~ 305 (423)
T Consensus 219 rtvvV~atsd~p~~~R~~a~~~a~aiAEyfrd~Gk~VLli~DslTr~A~A~REisl~~gepP~~~gYp~~vf~~l~~L~E 298 (445)
T PRK06820 219 RTVVVVATSDRPALERLKGLSTATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLE 298 (445)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 06999416768989999998761148899986798489984465788889989998647999767778549988888887
Q ss_pred CCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHH
Q ss_conf 25777777850012112012676554138898852266078980878847999740533542210155199999999999
Q gi|254780810|r 306 AARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKEDLLVERQDLQKVFM 385 (423)
Q Consensus 306 ~ar~~~~~Gs~T~~~t~lvetg~~~d~~i~~~~~~~~d~~i~L~r~la~~~~~PAId~~~S~sR~~~~l~~~~~~~~~~~ 385 (423)
T Consensus 299 Rag~~~-~GSITal~~V~~~-~dD~tdpi~d~~~silDG~ivLsr~La~~g~yPAIDvl~SvSRv~~~~~~~~h~~~a~~ 376 (445)
T PRK06820 299 RTGNSD-RGSITAFYTVLVE-GDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQK 376 (445)
T ss_pred HHCCCC-CCCEEEEEEEEEC-CCCCCCCCHHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCHHHCCHHHCCHHHHHHHHH
T ss_conf 304788-9756778889705-88767771676756515389984879866999981874056454622202999999999
Q ss_pred HHHHHHCCCCHHHHHHH
Q ss_conf 99996126937899999
Q gi|254780810|r 386 LRRIVSSMNSSDAIEFL 402 (423)
Q Consensus 386 ~r~~l~~~~~~e~~~~l 402 (423)
T Consensus 377 ~r~~la~y~e~e~li~~ 393 (445)
T PRK06820 377 LRRMLACYQEIELLVQI 393 (445)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999999999999984