HHsearch alignment for GI: 254780810 and conserved domain: PRK07952
>PRK07952 DNA replication protein DnaC; Validated.
Probab=95.53 E-value=0.014 Score=36.08 Aligned_cols=76 Identities=17% Similarity=0.250 Sum_probs=48.8
Q ss_pred CCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE-ECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 44300020001122343247786532136888998865510231222-04877878999999999986118864699995
Q gi|254780810|r 133 KIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLI-VAPPRTGKTILLQNIAHSIKKNHPECYLIVLL 211 (423)
Q Consensus 133 ~~~f~~l~p~~p~~~i~le~~~~~p~~~~~~~id~~~pig~gqr~~i-~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~l 211 (423)
T Consensus 65 ~~~Feny~~~~~~q~--------~al~~a~~y~enf~---~~~~gLlF~G~~GTGKThLA~aIan~Li~~G~sVlf~t-- 131 (242)
T PRK07952 65 NCSFENYRVECEGQM--------NALSKARQYVEEFD---GNIASFIFSGKPGTGKNHLAAAICNELLLRGKSVLIIT-- 131 (242)
T ss_pred CCEEECEECCCHHHH--------HHHHHHHHHHHHHC---CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE--
T ss_conf 884212015877789--------99999999998654---38871799789999789999999999998799499977--
Q ss_pred CCCCHHHHHHHHHHHCC
Q ss_conf 08787899999984034
Q gi|254780810|r 212 IDERPEEVTDMQRSVQG 228 (423)
Q Consensus 212 igEr~~ev~e~~~~~~~ 228 (423)
T Consensus 132 -------~~dLl~~lr~ 141 (242)
T PRK07952 132 -------VADIMSAMKD 141 (242)
T ss_pred -------HHHHHHHHHH
T ss_conf -------9999999999