HHsearch alignment for GI: 254780810 and conserved domain: PRK08118

>PRK08118 topology modulation protein; Reviewed.

Probab=95.71  E-value=0.014  Score=36.06  Aligned_cols=52  Identities=6%  Similarity=0.088  Sum_probs=33.3

Q ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH
Q ss_conf             3122204877878999999999986118864699995087878999999840
Q gi|254780810|r  175 QRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSV  226 (423)
Q Consensus       175 qr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~~~~~  226 (423)
T Consensus         2 ~rI~IiG~~GsGKSTlAr~L~~~~~ip~~~LD~l~w~~~w~~~~~~e~~~~~   53 (167)
T PRK08118          2 KKIILIGSGGSGKSTLARQLGEKLNIPVHHLDALFWKPNWEGVPKEEQRTVQ   53 (167)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCEEECCCCCCCCHHHHHHHH
T ss_conf             6799988999879999999999889697964434766899468889999999