HHsearch alignment for GI: 254780810 and conserved domain: PRK09183

>PRK09183 transposase/IS protein; Provisional.
Probab=94.16  E-value=0.085  Score=30.94  Aligned_cols=38  Identities=16%  Similarity=0.261  Sum_probs=29.9

Q ss_pred             HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf             86551023122204877878999999999986118864
Q gi|254780810|r  168 IAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPEC  205 (423)
Q Consensus       168 ~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v  205 (423)
T Consensus        95 ~~fi~~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v  132 (258)
T PRK09183         95 LSFIERNENIVLLGPSGVGKTHLAIALGYEAVRAGIKV  132 (258)
T ss_pred             CCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEE
T ss_conf             81665588679989999868999999999999879939