HHsearch alignment for GI: 254780810 and conserved domain: PRK09361

>PRK09361 radB DNA repair and recombination protein RadB; Provisional.
Probab=97.93  E-value=0.00013  Score=49.40  Aligned_cols=113  Identities=23%  Similarity=0.265  Sum_probs=68.8

Q ss_pred             CCCCCHHHHHHHHHHH--HHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC--CHHHHHHHHHH-----
Q ss_conf             6532136888998865--51023122204877878999999999986118864699995087--87899999984-----
Q gi|254780810|r  155 PENKDISSRVIDLIAP--IGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDE--RPEEVTDMQRS-----  225 (423)
Q Consensus       155 ~~p~~~~~~~id~~~p--ig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligE--r~~ev~e~~~~-----  225 (423)
T Consensus         2 ~erisTG~~~lD~~LgGGi~~G~itei~G~pG~GKTtl~lq~a~~~~~~g~--~vlYi-dtE~~~~er~~qi~~~~~~~~   78 (224)
T PRK09361          2 EELLPTGCKSLDELLGGGIERGTITQIYGPPGSGKTNICIQLAVEAARQGK--KVIYI-DTEGLSPERFKQIAGEDFEEL   78 (224)
T ss_pred             CCEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC--CEEEE-CCCCCCHHHHHHHHCCCHHHH
T ss_conf             853037978999862699888879999899998599999999999997499--09996-787678899999856573454


Q ss_pred             HCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHH
Q ss_conf             0342782366788889999999999999999977992899981638987762
Q gi|254780810|r  226 VQGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAY  277 (423)
Q Consensus       226 ~~~~vv~st~d~~~~~~~~~a~~a~~~a~~~~e~G~dVll~~DslTR~ArA~  277 (423)
T Consensus        79 ~~~i~~~~~~~~~~------~~~~i~~~~~~~~~~-~~lvVIDSi~~~~~~e  123 (224)
T PRK09361         79 LSNIIIFEPSSFEE------QREAIQKAEKIAKEN-VGLIVLDSATSLYRLE  123 (224)
T ss_pred             HHCCEEECCCCHHH------HHHHHHHHHHHHHCC-CCEEEEECCHHHEEHH
T ss_conf             20614724798899------999999999875058-7389996230100000