HHsearch alignment for GI: 254780810 and conserved domain: PRK10789
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional.
Probab=95.39 E-value=0.019 Score=35.18 Aligned_cols=198 Identities=17% Similarity=0.311 Sum_probs=97.0
Q ss_pred HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCH-HH--HHHHHHHH---C--CEEEECC-----
Q ss_conf 8655102312220487787899999999998611886469999508787-89--99999840---3--4278236-----
Q gi|254780810|r 168 IAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERP-EE--VTDMQRSV---Q--GEVISST----- 234 (423)
Q Consensus 168 ~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~-~e--v~e~~~~~---~--~~vv~st----- 234 (423)
T Consensus 335 sl~I~~Ge~vaIVG~SGsGKSTLl~LL~g~y~p~~G~I-----~idg~di~~i~~~~lR~~I~~V~Q~~~LF~~TI~eNI 409 (569)
T PRK10789 335 NFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDI-----RFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNI 409 (569)
T ss_pred CCEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCE-----EEECEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHH
T ss_conf 56888997899879999987999999997764267874-----6501013425768886314765887502566299998
Q ss_pred -CCC--CHHHHH-HHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCHHHHHCCCCC
Q ss_conf -678--888999-9999999999999977992899981638987762001366777677752024665046875225777
Q gi|254780810|r 235 -FDE--SAARHV-QVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGVDANALQRPKRFFGAARNI 310 (423)
Q Consensus 235 -~d~--~~~~~~-~~a~~a~~~a~~~~e~G~dVll~~DslTR~ArA~~~~~~~~g~~~~gg~~~~~l~~~~~~~~~ar~~ 310 (423)
T Consensus 410 ~lg~~~~~~eei~~a~~~a~---------------l~~~i~~lp~G~dT~ige~G~~LSGGQrQR------i--alARAl 466 (569)
T PRK10789 410 ALGRPDATQQEIEHVARLAS---------------VHEDILRLPQGYDTEVGERGVMLSGGQKQR------I--SIARAL 466 (569)
T ss_pred HCCCCCCCHHHHHHHHHHHH---------------HHHHHHCCCCCCCCCCCCCCCCCCHHHHHH------H--HHHHHH
T ss_conf 65797765458999999855---------------568764375532371268889969999999------9--999999
Q ss_pred CCCCCCEEE--EEEEECCCCCCCCHHHHHHHHCCC--CEEEEEHHHHHCCCCCCCCCCCCCC-----CCHHHCCCHHHHH
Q ss_conf 777850012--112012676554138898852266--0789808788479997405335422-----1015519999999
Q gi|254780810|r 311 KEGGSLTII--GTALVDTGSRMDEVIFEEFKGTGN--SEIVLERKIADKRIFPAMDIIKSGT-----RKEDLLVERQDLQ 381 (423)
Q Consensus 311 ~~~Gs~T~~--~t~lvetg~~~d~~i~~~~~~~~d--~~i~L~r~la~~~~~PAId~~~S~s-----R~~~~l~~~~~~~ 381 (423)
T Consensus 467 l~~p~iliLDEaTSaLD~--~tE~~i~~~l~~~~~~~T~i~IaHRlsti~~aD~I~vl~~G~ive~Gth~eLl~~~g~Y~ 544 (569)
T PRK10789 467 LLNAEILILDDALSAVDG--RTEHQILHNLRQWGEGRTVIISAHRLSALTEASEIIVMQHGHIAQRGNHDQLAQQSGWYR 544 (569)
T ss_pred HCCCCEEEECCCCCCCCH--HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCHHH
T ss_conf 549998998087666899--999999999999749998999715888898599899998988999727999985899899
Q ss_pred HHHHHHHHHHCCCC
Q ss_conf 99999999612693
Q gi|254780810|r 382 KVFMLRRIVSSMNS 395 (423)
Q Consensus 382 ~~~~~r~~l~~~~~ 395 (423)
T Consensus 545 ~l~~~Q~~~~~~~~ 558 (569)
T PRK10789 545 DMYRYQQLEAALDD 558 (569)
T ss_pred HHHHHHHCCCCCCC
T ss_conf 99999851243336