HHsearch alignment for GI: 254780810 and conserved domain: PRK11629
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional.
Probab=94.91 E-value=0.018 Score=35.31 Aligned_cols=30 Identities=30% Similarity=0.467 Sum_probs=26.4
Q ss_pred HHHHHHCCCCEEEECCCCCCHHHHHHHHHH
Q ss_conf 886551023122204877878999999999
Q gi|254780810|r 167 LIAPIGKGQRSLIVAPPRTGKTILLQNIAH 196 (423)
Q Consensus 167 ~~~pig~gqr~~i~~~~~~gkt~ll~~ia~ 196 (423)
T Consensus 28 vs~~i~~GE~v~iiG~sGsGKSTLl~~i~G 57 (233)
T PRK11629 28 VSFSIGEGEMMAIVGSSGSGKSTLLHLLGG 57 (233)
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 289988998999999999409999999966