HHsearch alignment for GI: 254780810 and conserved domain: PRK12377
>PRK12377 putative replication protein; Provisional.
Probab=93.84 E-value=0.12 Score=29.91 Aligned_cols=63 Identities=17% Similarity=0.260 Sum_probs=39.9
Q ss_pred CCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 4430002000112234324778653213688899886551023122204877878999999999986118864
Q gi|254780810|r 133 KIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPEC 205 (423)
Q Consensus 133 ~~~f~~l~p~~p~~~i~le~~~~~p~~~~~~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v 205 (423)
T Consensus 70 ~~~f~ny~~~~~~~~~a~--------~~a~~~~~~F--~~~~~NlIf~G~pGtGKTHLA~AIg~~a~~~G~sV 132 (248)
T PRK12377 70 KCSFANYQVQNDGQRYAL--------SQAKSIADEL--MTGCTNFVFSGKPGTGKNHLAAAIGNRLLAKGRSV 132 (248)
T ss_pred CCCCCCCCCCCHHHHHHH--------HHHHHHHHHH--HCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEE
T ss_conf 386345645787899999--------9999999987--31886089989999878899999999999879969