HHsearch alignment for GI: 254780810 and conserved domain: TIGR01846

>TIGR01846 type_I_sec_HlyB type I secretion system ATPase; InterPro: IPR010132 Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This entry contains one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N terminus, but rather carry signals located toward the extreme C terminus to direct type I secretion.; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015031 protein transport, 0016021 integral to membrane.
Probab=94.98  E-value=0.012  Score=36.51  Aligned_cols=151  Identities=22%  Similarity=0.261  Sum_probs=79.6

Q ss_pred             CCEEECCCCCCCHHHHH--CCC--CHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH
Q ss_conf             00022225568878851--244--30002000112234324778653213688899886551023122204877878999
Q gi|254780810|r  115 ALLKVNAINFDVPERVR--NKI--HFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPPRTGKTIL  190 (423)
Q Consensus       115 ~L~rV~~vnG~~~d~~~--~~~--~f~~l~p~~p~~~i~le~~~~~p~~~~~~~id~~~pig~gqr~~i~~~~~~gkt~l  190 (423)
T Consensus       434 a~~RlGDiLn~P~E~~~d~g~aalP~l~G~i~F~nirFRY~pD--~P----eVL~nl~L~I~~Ge~IGIvGpSGSGKSTL  507 (703)
T TIGR01846       434 AIERLGDILNSPTEPSSDAGLAALPELKGSITFENIRFRYKPD--SP----EVLSNLSLDIKPGEVIGIVGPSGSGKSTL  507 (703)
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC--CC----HHHHCCCCCCCCCEEEEEECCCCCCHHHH
T ss_conf             6531210058684889998730354225726787533146888--71----78732687657865799872789867899


Q ss_pred             HHHHHHHHHHCCCCCEEEEEECCCCHHHHHH-----------------HHHHHCCEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             9999999861188646999950878789999-----------------99840342782366788889999999999999
Q gi|254780810|r  191 LQNIAHSIKKNHPECYLIVLLIDERPEEVTD-----------------MQRSVQGEVISSTFDESAARHVQVAEMVIAKA  253 (423)
Q Consensus       191 l~~ia~~~~~~~~~v~~i~~ligEr~~ev~e-----------------~~~~~~~~vv~st~d~~~~~~~~~a~~a~~~a  253 (423)
T Consensus       508 TKL~QR---LYtP~~Gq--VLVDG~DLA~~DP~wLRRQ~gVVLQEn~LFsrSirdNI~l~~P~~~~E~Vi~AA~LAGA~-  581 (703)
T TIGR01846       508 TKLLQR---LYTPEHGQ--VLVDGVDLAIADPAWLRRQVGVVLQENVLFSRSIRDNIALCNPGASVEHVIAAAKLAGAH-  581 (703)
T ss_pred             HHHHHH---HCCCCCCE--EEECCCCCCCCCCCHHHHCCEEEEECCHHHCCCHHHHHHHCCCCCCHHHHHHHHHHCCHH-
T ss_conf             999886---14888874--777030001018520102230234000210122788985177776989999998621858-


Q ss_pred             HHHHHCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             99997799289998163898776200136677767775
Q gi|254780810|r  254 KCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGG  291 (423)
Q Consensus       254 ~~~~e~G~dVll~~DslTR~ArA~~~~~~~~g~~~~gg  291 (423)
T Consensus       582 --------------dFI~~Lp~GY~T~vgE~G~~LSGG  605 (703)
T TIGR01846       582 --------------DFISELPQGYNTEVGEKGANLSGG  605 (703)
T ss_pred             --------------HHHHHCCCCCCCCCEEECCCCCCH
T ss_conf             --------------999736376774001241566733