HHsearch alignment for GI: 254780810 and conserved domain: TIGR02173
>TIGR02173 cyt_kin_arch cytidylate kinase, putative; InterPro: IPR011892 Proteins in this family are believed to be cytidylate kinase. Members of this family are found in the archaea and in spirochaetes, and differ considerably from the common bacterial form of cytidylate kinase described by IPR003136 from INTERPRO.; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=93.50 E-value=0.048 Score=32.57 Aligned_cols=24 Identities=29% Similarity=0.504 Sum_probs=20.3
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 220487787899999999998611
Q gi|254780810|r 178 LIVAPPRTGKTILLQNIAHSIKKN 201 (423)
Q Consensus 178 ~i~~~~~~gkt~ll~~ia~~~~~~ 201 (423)
T Consensus 4 ~ISGpPGSGktTvA~~lA~~Lsl~ 27 (173)
T TIGR02173 4 TISGPPGSGKTTVAKILAEKLSLK 27 (173)
T ss_pred EEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 873589686478999999863983