HHsearch alignment for GI: 254780810 and conserved domain: TIGR03269

>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=94.15  E-value=0.031  Score=33.86  Aligned_cols=28  Identities=32%  Similarity=0.305  Sum_probs=23.7

Q ss_pred             HHHHCCCCEEEECCCCCCHHHHHHHHHH
Q ss_conf             6551023122204877878999999999
Q gi|254780810|r  169 APIGKGQRSLIVAPPRTGKTILLQNIAH  196 (423)
Q Consensus       169 ~pig~gqr~~i~~~~~~gkt~ll~~ia~  196 (423)
T Consensus       305 ~~v~~GEi~gi~G~nGsGKsTL~k~l~G  332 (520)
T TIGR03269       305 LEVKEGEIFGIVGTSGAGKTTLSKIIAG  332 (520)
T ss_pred             EEECCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf             8972896899987888878999999948