HHsearch alignment for GI: 254780810 and conserved domain: TIGR03269
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=94.15 E-value=0.031 Score=33.86 Aligned_cols=28 Identities=32% Similarity=0.305 Sum_probs=23.7
Q ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHH
Q ss_conf 6551023122204877878999999999
Q gi|254780810|r 169 APIGKGQRSLIVAPPRTGKTILLQNIAH 196 (423)
Q Consensus 169 ~pig~gqr~~i~~~~~~gkt~ll~~ia~ 196 (423)
T Consensus 305 ~~v~~GEi~gi~G~nGsGKsTL~k~l~G 332 (520)
T TIGR03269 305 LEVKEGEIFGIVGTSGAGKTTLSKIIAG 332 (520)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 8972896899987888878999999948