HHsearch alignment for GI: 254780810 and conserved domain: TIGR03415
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=94.91 E-value=0.018 Score=35.41 Aligned_cols=69 Identities=16% Similarity=0.191 Sum_probs=41.6
Q ss_pred EECCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH
Q ss_conf 22225568878851244300020001122343247786532136888998865510231222048778789999999999
Q gi|254780810|r 118 KVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHS 197 (423)
Q Consensus 118 rV~~vnG~~~d~~~~~~~f~~l~p~~p~~~i~le~~~~~p~~~~~~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~ 197 (423)
T Consensus 5 ~l~kiFG~~~~~a~~~~~~g-~----~k~~i~~~tg------~~vAV~dvsl~I~~GEi~~lvGpSGsGKSTLLr~i~GL 73 (382)
T TIGR03415 5 NVDVVFGDQPAEALALLDQG-K----TREEILDETG------LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGL 73 (382)
T ss_pred EEEEECCCCHHHHHHHHHCC-C----CHHHHHHHHC------CEEEEECCEEEECCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 78995289989999999879-9----9899988339------99989651748879989999999973499999999759