HHsearch alignment for GI: 254780810 and conserved domain: TIGR03608
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=95.72 E-value=0.011 Score=36.92 Aligned_cols=60 Identities=25% Similarity=0.359 Sum_probs=41.4
Q ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEE----ECCCCHHHHHHHHHHHCCEEE
Q ss_conf 655102312220487787899999999998611886469999----508787899999984034278
Q gi|254780810|r 169 APIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVL----LIDERPEEVTDMQRSVQGEVI 231 (423)
Q Consensus 169 ~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~----ligEr~~ev~e~~~~~~~~vv 231 (423)
T Consensus 19 l~i~~Ge~~~i~GpSGsGKSTLL~~i~g-l~~--p~sG~i~~~g~~~~~~~~~~~~~~rr~~iG~Vf 82 (206)
T TIGR03608 19 LTIEKGKMVAIVGESGSGKSTLLNIIGL-LEK--PDSGQVYLNGQETPPINSKKASKFRREKLGYLF 82 (206)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHHC-CCC--CCCEEEEECCEECCCCCHHHHHHHHHCCEEEEC
T ss_conf 7986998999987999709999999975-999--897599999999998998899999865889985