HHsearch alignment for GI: 254780810 and conserved domain: cd01122

>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.

Probab=95.52  E-value=0.2  Score=28.55  Aligned_cols=61  Identities=18%  Similarity=0.260  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHH-HHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH
Q ss_conf             36888998865-510231222048778789999999999861188646999950878789999
Q gi|254780810|r  160 ISSRVIDLIAP-IGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTD  221 (423)
Q Consensus       160 ~~~~~id~~~p-ig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e  221 (423)
T Consensus        15 ~pf~~LD~~~~Gl~~GeL~viaarpg~GKT~f~~~~a~~~~~~~-g~~vl~~SlEm~~~~~~~   76 (271)
T cd01122          15 WPFPVLNKLTKGLRKGELIILTAGTGVGKTTFLREYALDLITQH-GVRVGTISLEEPVVRTAR   76 (271)
T ss_pred             CCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHC-CCEEEEEECCCCHHHHHH
T ss_conf             88166888737999980899996899869999999999999976-990899970499999999