HHsearch alignment for GI: 254780810 and conserved domain: cd03231
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=94.82 E-value=0.021 Score=34.90 Aligned_cols=29 Identities=28% Similarity=0.410 Sum_probs=26.1
Q ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHH
Q ss_conf 65510231222048778789999999999
Q gi|254780810|r 169 APIGKGQRSLIVAPPRTGKTILLQNIAHS 197 (423)
Q Consensus 169 ~pig~gqr~~i~~~~~~gkt~ll~~ia~~ 197 (423)
T Consensus 21 ~~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl 49 (201)
T cd03231 21 FTLAAGEALQVTGPNGSGKTTLLRILAGL 49 (201)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 88879959999999999999999999667