>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=95.11  E-value=0.011  Score=36.67  Aligned_cols=49  Identities=18%  Similarity=0.287  Sum_probs=31.5

Q ss_pred             HHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHH
Q ss_conf             5510231222048778789999999999861188646999950878789
Q gi|254780810|r  170 PIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEE  218 (423)
Q Consensus       170 pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~e  218 (423)
T Consensus        21 ti~~GEiv~liGpNGaGKSTLlk~l~Gll~p~~G~I~~~g~~i~~~pq~   69 (246)
T cd03237          21 SISESEVIGILGPNGIGKTTFIKMLAGVLKPDEGDIEIELDTVSYKPQY   69 (246)
T ss_pred             CCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHH
T ss_conf             4657989999979997699999999778788860799898205768743