HHsearch alignment for GI: 254780810 and conserved domain: cd03249
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=95.32 E-value=0.013 Score=36.39 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=27.6
Q ss_pred HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 88655102312220487787899999999998
Q gi|254780810|r 167 LIAPIGKGQRSLIVAPPRTGKTILLQNIAHSI 198 (423)
Q Consensus 167 ~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~ 198 (423)
T Consensus 22 isl~i~~G~~iaIvG~sGsGKSTLl~ll~gl~ 53 (238)
T cd03249 22 LSLTIPPGKTVALVGSSGCGKSTVVSLLERFY 53 (238)
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 58997699999999999998999999982386