>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=95.31 E-value=0.012 Score=36.52 Aligned_cols=59 Identities=20% Similarity=0.424 Sum_probs=38.0 Q ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEE----ECCCCHHHHHHHHHHHCCEEE Q ss_conf 655102312220487787899999999998611886469999----508787899999984034278 Q gi|254780810|r 169 APIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVL----LIDERPEEVTDMQRSVQGEVI 231 (423) Q Consensus 169 ~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~----ligEr~~ev~e~~~~~~~~vv 231 (423) T Consensus 21 l~i~~Ge~~~iiG~SGsGKSTll~~i~g-L~~--p~~G~I~~~g~~i~~~~~~~~~~~r~~i-g~vf 83 (235) T cd03261 21 LDVRRGEILAIIGPSGSGKSTLLRLIVG-LLR--PDSGEVLIDGEDISGLSEAELYRLRRRM-GMLF 83 (235) T ss_pred EEECCCCEEEEECCCCCHHHHHHHHHHC-CCC--CCCCEEEECCEECCCCCHHHHHHHHCCE-EEEE T ss_conf 4887998999999999729999999975-999--8985899999999989988999975782-9970

HHsearch alignment for GI: 254780810 and conserved domain: cd03261