HHsearch alignment for GI: 254780810 and conserved domain: cd03268
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=92.29 E-value=0.11 Score=30.29 Aligned_cols=33 Identities=27% Similarity=0.285 Sum_probs=27.6
Q ss_pred HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 865510231222048778789999999999861
Q gi|254780810|r 168 IAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKK 200 (423)
Q Consensus 168 ~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~ 200 (423)
T Consensus 20 s~~v~~Gei~gllG~NGaGKSTLl~~i~Gl~~p 52 (208)
T cd03268 20 SLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKP 52 (208)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCC
T ss_conf 668869819999999999999999999578378