HHsearch alignment for GI: 254780810 and conserved domain: pfam04851

>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=93.68  E-value=0.2  Score=28.54  Aligned_cols=39  Identities=23%  Similarity=0.325  Sum_probs=29.0

Q ss_pred             HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             888998865510231222048778789999999999861188
Q gi|254780810|r  162 SRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHP  203 (423)
Q Consensus       162 ~~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~  203 (423)
T Consensus         9 ~~a~~~~~---~~~~~~i~~pTGsGKT~~~~~~i~~~~~~~~   47 (103)
T pfam04851         9 IEAIRNLL---EKKRGLIVMATGSGKTLTAAKLIARLLKGKK   47 (103)
T ss_pred             HHHHHHHH---HCCCEEEEECCCCCHHHHHHHHHHHHHHCCC
T ss_conf             99999999---6398699958999879999999999984699