BLAST/PSIBLAST alignment of GI: 254780810 and GI: 15890078 at iteration 1
>gi|15890078|ref|NP_355759.1| transcription termination factor Rho [Agrobacterium tumefaciens str. C58] Length = 421
>gi|15158063|gb|AAK88544.1| transcription termination factor Rho [Agrobacterium tumefaciens str. C58] Length = 421
 Score =  726 bits (1873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/420 (82%), Positives = 387/420 (92%)

Query: 1   MSEMKLQELKNKSPTKLLAFAESLEIENANVMRKQELMFSILKVLSGRDVEIIGEGVIEV 60
           M+EMKLQELK+KSPT LL FAESLE+ENA+ MRKQELMF+ILK+L+ +DVEIIGEGV+EV
Sbjct: 1   MAEMKLQELKSKSPTDLLTFAESLEVENASTMRKQELMFAILKILASQDVEIIGEGVVEV 60

Query: 61  LQDGFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVN 120
           LQDGFGFLRS +ANYL GPDDIY+SPSQI+ FSLKTGDTVEG IR P+EGERYFALLKVN
Sbjct: 61  LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN 120

Query: 121 AINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIV 180
            INFD PE++R+K+HFDNLTPLYP++RF MEL  P +KD+SSRVIDL+AP+GKGQR LIV
Sbjct: 121 TINFDDPEKIRHKVHFDNLTPLYPNERFKMELEVPTSKDLSSRVIDLVAPLGKGQRGLIV 180

Query: 181 APPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFDESAA 240
           APPRTGKT+LLQNIAHSI  NHPECYLIVLLIDERPEEVTDMQRSV+GEV+SSTFDE A 
Sbjct: 181 APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAV 240

Query: 241 RHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGVDANALQRP 300
           RHVQVAEMVI KAK LVE+G DVVILLDSITRL RAYN ++PSSGK+LTGGVDANALQRP
Sbjct: 241 RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP 300

Query: 301 KRFFGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPA 360
           KRFFGAARNI+EGGSLTII TAL+DTGSRMDEVIFEEFKGTGNSEIVL+RK+ADKRIFPA
Sbjct: 301 KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA 360

Query: 361 MDIIKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFLIDKLKQTKDNKDFFYSMN 420
           +DI+KSGTRKEDLLV RQDLQK+F+LRRI++ M + DAIEFLIDKLKQTK N DFF SMN
Sbjct: 361 LDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTMDAIEFLIDKLKQTKTNSDFFESMN 420