RPSBLAST alignment for GI: 254780810 and conserved domain: PRK06936
>gnl|CDD|180762 PRK06936, PRK06936, type III secretion system ATPase; Provisional. Length = 439
Score = 73.2 bits (180), Expect = 1e-13
Identities = 66/242 (27%), Positives = 121/242 (50%), Gaps = 24/242 (9%)
Query: 163 RVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVL-LIDERPEEVTD 221
RVID + G+GQR I A GK+ LL ++ I+ E + VL LI ER EV +
Sbjct: 151 RVIDGLLTCGEGQRMGIFAAAGGGKSTLLASL---IR--SAEVDVTVLALIGERGREVRE 205
Query: 222 ----------MQRSVQGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSIT 271
++++V ++ +T D + + + + A+ + G V++L+DS+T
Sbjct: 206 FIESDLGEEGLRKAV---LVVATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVT 262
Query: 272 RLCRAYNVLMPSSGKILT--GGVDANALQRPKRFFGAARNIKEGGSLTIIGTALVDTGSR 329
R RA + ++G+ T G + P+ A ++ K GS+T + T LV+ G
Sbjct: 263 RFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSDK--GSITALYTVLVE-GDD 319
Query: 330 MDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKEDLLVERQDLQKVFMLRRI 389
M E + +E + + I+L RK+A +PA+D+++S +R + +V ++ LR +
Sbjct: 320 MTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGRLREL 379
Query: 390 VS 391
++
Sbjct: 380 LA 381