RPSBLAST alignment for GI: 254780810 and conserved domain: PRK06936

>gnl|CDD|180762 PRK06936, PRK06936, type III secretion system ATPase; Provisional. Length = 439
 Score = 73.2 bits (180), Expect = 1e-13
 Identities = 66/242 (27%), Positives = 121/242 (50%), Gaps = 24/242 (9%)

Query: 163 RVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVL-LIDERPEEVTD 221
           RVID +   G+GQR  I A    GK+ LL ++   I+    E  + VL LI ER  EV +
Sbjct: 151 RVIDGLLTCGEGQRMGIFAAAGGGKSTLLASL---IR--SAEVDVTVLALIGERGREVRE 205

Query: 222 ----------MQRSVQGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSIT 271
                     ++++V   ++ +T D  +    +   +  + A+   + G  V++L+DS+T
Sbjct: 206 FIESDLGEEGLRKAV---LVVATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVT 262

Query: 272 RLCRAYNVLMPSSGKILT--GGVDANALQRPKRFFGAARNIKEGGSLTIIGTALVDTGSR 329
           R  RA   +  ++G+  T  G   +     P+    A ++ K  GS+T + T LV+ G  
Sbjct: 263 RFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSDK--GSITALYTVLVE-GDD 319

Query: 330 MDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKEDLLVERQDLQKVFMLRRI 389
           M E + +E +   +  I+L RK+A    +PA+D+++S +R  + +V ++       LR +
Sbjct: 320 MTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGRLREL 379

Query: 390 VS 391
           ++
Sbjct: 380 LA 381