RPSBLAST alignment for GI: 254780810 and conserved domain: PRK12608
>gnl|CDD|183622 PRK12608, PRK12608, transcription termination factor Rho; Provisional. Length = 380
Score = 538 bits (1389), Expect = e-154
Identities = 225/366 (61%), Positives = 289/366 (78%), Gaps = 6/366 (1%)
Query: 55 EGVIEVLQDGFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYF 114
GV+E+L DGFGFLRS NYL PDD++V P+ I+ F+L+TGD VEG R ERY
Sbjct: 20 LGVLEILGDGFGFLRSARRNYLPSPDDVFVPPALIRRFNLRTGDVVEGVARPR---ERYR 76
Query: 115 ALLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKG 174
L++V+++N PE++ + HFD+LTPL+P +R +E + D+S RV+DL+APIGKG
Sbjct: 77 VLVRVDSVNGTDPEKLARRPHFDDLTPLHPRERLRLETGS---DDLSMRVVDLVAPIGKG 133
Query: 175 QRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISST 234
QR LIVAPPR GKT+LLQ IA ++ NHPE +L+VLLIDERPEEVTDM+RSV+GEV +ST
Sbjct: 134 QRGLIVAPPRAGKTVLLQQIAAAVAANHPEVHLMVLLIDERPEEVTDMRRSVKGEVYAST 193
Query: 235 FDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGVDA 294
FD H++VAE+V+ +AK LVE G DVVILLDS+TRL RAYN + SSG+ L+GGVDA
Sbjct: 194 FDRPPDEHIRVAELVLERAKRLVEQGKDVVILLDSLTRLARAYNNEVESSGRTLSGGVDA 253
Query: 295 NALQRPKRFFGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIAD 354
ALQRPKR FGAARNI+EGGSLTII TALVDTGSRMDEVIFEEFKGTGN EIVL+R++AD
Sbjct: 254 RALQRPKRLFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNMEIVLDRELAD 313
Query: 355 KRIFPAMDIIKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFLIDKLKQTKDNKD 414
KR+FPA+DI KSGTR+E+LL++ ++L+KV LRR ++S +A+E L++KL++T DN +
Sbjct: 314 KRVFPAIDIAKSGTRREELLLDSKELEKVRRLRRALASRKPVEAMEALLEKLRETPDNAE 373
Query: 415 FFYSMN 420
F S+
Sbjct: 374 FLNSVQ 379