RPSBLAST alignment for GI: 254780810 and conserved domain: PRK12678
>gnl|CDD|183675 PRK12678, PRK12678, transcription termination factor Rho; Provisional. Length = 672
Score = 566 bits (1462), Expect = e-162
Identities = 213/373 (57%), Positives = 285/373 (76%), Gaps = 12/373 (3%)
Query: 56 GVIEVLQDGFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGER--- 112
G+++VL D + F+R + YL GP+D+YVS +Q++ L+ GD V G++RAPREGE+
Sbjct: 298 GILDVL-DNYAFVR--TSGYLPGPNDVYVSMNQVRKNGLRKGDAVTGAVRAPREGEQGNQ 354
Query: 113 ---YFALLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIA 169
+ L++++++N PE + + F LTPLYP++R +E E K +++RVIDLI
Sbjct: 355 RQKFNPLVRLDSVNGMSPEEAKKRPEFGKLTPLYPNERLRLE---TEPKKLTTRVIDLIM 411
Query: 170 PIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGE 229
PIGKGQR LIV+PP+ GKT +LQNIA++I N+PEC+L+V+L+DERPEEVTDMQRSV+GE
Sbjct: 412 PIGKGQRGLIVSPPKAGKTTILQNIANAITTNNPECHLMVVLVDERPEEVTDMQRSVKGE 471
Query: 230 VISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILT 289
VI+STFD + H VAE+ I +AK LVE G DVV+LLDSITRL RAYN+ P+SG+IL+
Sbjct: 472 VIASTFDRPPSDHTTVAELAIERAKRLVELGKDVVVLLDSITRLGRAYNLAAPASGRILS 531
Query: 290 GGVDANALQRPKRFFGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLE 349
GGVD+ AL PKRFFGAARNI+ GGSLTII TALV+TGS+MDEVIFEEFKGTGN E+ L+
Sbjct: 532 GGVDSTALYPPKRFFGAARNIENGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELKLD 591
Query: 350 RKIADKRIFPAMDIIKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFLIDKLKQT 409
RK+ADKRIFPA+D+ SGTRKE+LL+ +L V LRR++S ++S AI+ LI +LK+T
Sbjct: 592 RKLADKRIFPAVDVNASGTRKEELLLSPDELAIVHKLRRVLSGLDSQQAIDLLISRLKKT 651
Query: 410 KDNKDFFYSMNKQ 422
K N +F ++K
Sbjct: 652 KSNYEFLMQVSKT 664