RPSBLAST alignment for GI: 254780810 and conserved domain: COG1158

>gnl|CDD|31352 COG1158, Rho, Transcription termination factor [Transcription]. Length = 422
 Score =  683 bits (1763), Expect = 0.0
 Identities = 294/423 (69%), Positives = 357/423 (84%), Gaps = 1/423 (0%)

Query: 1   MSEMKLQELKNKSPTKLLAFAESLEIENANVMRKQELMFSILKVLSGRDVEIIGEGVIEV 60
           ++EM L ELKNK  ++LL  AE L IEN + +RKQ+L+F+ILK  + +  EI G+GV+E+
Sbjct: 1   VAEMSLTELKNKPLSELLELAEELGIENYSRLRKQDLIFAILKAQAEQGEEIFGDGVLEI 60

Query: 61  LQDGFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVN 120
           L DGFGFLRS D++YL GPDDIYVSPSQI+ F+L+TGDTVEG +R P+EGERYFALLKV 
Sbjct: 61  LPDGFGFLRSADSSYLPGPDDIYVSPSQIRRFNLRTGDTVEGKVRPPKEGERYFALLKVE 120

Query: 121 AINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIV 180
           A+N D PE+ +N++ F+NLTPLYP++R  +E     + D+S+RVIDLI+PIGKGQR LIV
Sbjct: 121 AVNGDDPEKAKNRVLFENLTPLYPNERLKLERE-NGSTDLSTRVIDLISPIGKGQRGLIV 179

Query: 181 APPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFDESAA 240
           APP+ GKT LLQNIA++I  NHPEC LIVLLIDERPEEVTDMQRSV+GEV++STFDE  +
Sbjct: 180 APPKAGKTTLLQNIANAITTNHPECELIVLLIDERPEEVTDMQRSVKGEVVASTFDEPPS 239

Query: 241 RHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGVDANALQRP 300
           RHVQVAEMVI KAK LVE+G DVVILLDSITRL RAYN ++PSSGK+L+GGVDANAL RP
Sbjct: 240 RHVQVAEMVIEKAKRLVEHGKDVVILLDSITRLARAYNTVVPSSGKVLSGGVDANALHRP 299

Query: 301 KRFFGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPA 360
           KRFFGAARNI+EGGSLTII TALVDTGSRMDEVIFEEFKGTGN E+ L+RK+A++RIFPA
Sbjct: 300 KRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNMELHLDRKLAERRIFPA 359

Query: 361 MDIIKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFLIDKLKQTKDNKDFFYSMN 420
           +DI KSGTRKE+LL+   +LQK+++LRRI+S M+  DAIEFLIDKLK+TK N +F   MN
Sbjct: 360 IDINKSGTRKEELLLSPDELQKMWVLRRILSPMDEIDAIEFLIDKLKKTKTNDEFLEQMN 419

Query: 421 KQN 423
           K  
Sbjct: 420 KSK 422