RPSBLAST alignment for GI: 254780810 and conserved domain: COG1158
>gnl|CDD|31352 COG1158, Rho, Transcription termination factor [Transcription]. Length = 422
Score = 683 bits (1763), Expect = 0.0
Identities = 294/423 (69%), Positives = 357/423 (84%), Gaps = 1/423 (0%)
Query: 1 MSEMKLQELKNKSPTKLLAFAESLEIENANVMRKQELMFSILKVLSGRDVEIIGEGVIEV 60
++EM L ELKNK ++LL AE L IEN + +RKQ+L+F+ILK + + EI G+GV+E+
Sbjct: 1 VAEMSLTELKNKPLSELLELAEELGIENYSRLRKQDLIFAILKAQAEQGEEIFGDGVLEI 60
Query: 61 LQDGFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVN 120
L DGFGFLRS D++YL GPDDIYVSPSQI+ F+L+TGDTVEG +R P+EGERYFALLKV
Sbjct: 61 LPDGFGFLRSADSSYLPGPDDIYVSPSQIRRFNLRTGDTVEGKVRPPKEGERYFALLKVE 120
Query: 121 AINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIV 180
A+N D PE+ +N++ F+NLTPLYP++R +E + D+S+RVIDLI+PIGKGQR LIV
Sbjct: 121 AVNGDDPEKAKNRVLFENLTPLYPNERLKLERE-NGSTDLSTRVIDLISPIGKGQRGLIV 179
Query: 181 APPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFDESAA 240
APP+ GKT LLQNIA++I NHPEC LIVLLIDERPEEVTDMQRSV+GEV++STFDE +
Sbjct: 180 APPKAGKTTLLQNIANAITTNHPECELIVLLIDERPEEVTDMQRSVKGEVVASTFDEPPS 239
Query: 241 RHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGVDANALQRP 300
RHVQVAEMVI KAK LVE+G DVVILLDSITRL RAYN ++PSSGK+L+GGVDANAL RP
Sbjct: 240 RHVQVAEMVIEKAKRLVEHGKDVVILLDSITRLARAYNTVVPSSGKVLSGGVDANALHRP 299
Query: 301 KRFFGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPA 360
KRFFGAARNI+EGGSLTII TALVDTGSRMDEVIFEEFKGTGN E+ L+RK+A++RIFPA
Sbjct: 300 KRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNMELHLDRKLAERRIFPA 359
Query: 361 MDIIKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFLIDKLKQTKDNKDFFYSMN 420
+DI KSGTRKE+LL+ +LQK+++LRRI+S M+ DAIEFLIDKLK+TK N +F MN
Sbjct: 360 IDINKSGTRKEELLLSPDELQKMWVLRRILSPMDEIDAIEFLIDKLKKTKTNDEFLEQMN 419
Query: 421 KQN 423
K
Sbjct: 420 KSK 422