HHsearch alignment for GI: 254780811 and conserved domain: pfam05425
>pfam05425 CopD Copper resistance protein D. Copper sequestering activity displayed by some bacteria is determined by copper-binding protein products of the copper resistance operon (cop). CopD, together with CopC, perform copper uptake into the cytoplasm.
Probab=97.50 E-value=0.0036 Score=37.67 Aligned_cols=86 Identities=14% Similarity=0.033 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCC---CHH---HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCC-CCCCCHHHHHHHHH
Q ss_conf 99999899999999999997012---123---20389999999999999999999-999999569-99988468999999
Q gi|254780811|r 89 FKVIMNPAMILSWVCGLYLAWKT---FYI---HIGWLRLKMISVLFLSFYHVYLS-FVMRKFRDK-KLFHSPKYFKIINE 160 (178)
Q Consensus 89 ~~~I~~PAmila~i~Gl~L~~~~---~~~---~~~Wl~vKL~~V~lL~~yH~~~~-~~lk~~~~g-~~~~s~~~~R~~NE 160 (178)
T Consensus 7 Fs~~a~~~v~~l~~sG~~~a~~~~~~~l~~t~yG~~l~~K~~lv~~~l~l~~~~r~~l~~~l~~~~~~~~~~~~l~r~~~ 86 (102)
T pfam05425 7 FSRLALVAVALLLVTGVVNALVLLLGGLLTTAYGRLLLAKLALVVLMLALAAANRFRLVPRLRRWPGGGRALGRLRRSVA 86 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 89889999999999999999999751623784789999999999999999999999977998707898357899999999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999984
Q gi|254780811|r 161 IPTLIMIIIVFLSV 174 (178)
Q Consensus 161 iP~llli~IViLVV 174 (178)
T Consensus 87 ~e~~l~~~il~~~~ 100 (102)
T pfam05425 87 IELVLGLLVLGLAA 100 (102)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999998