HHsearch alignment for GI: 254780812 and conserved domain: COG0407
>COG0407 HemE Uroporphyrinogen-III decarboxylase [Coenzyme metabolism].
Probab=100.00 E-value=0 Score=789.68 Aligned_cols=342 Identities=42% Similarity=0.717 Sum_probs=322.1
Q ss_pred CHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCEECCH
Q ss_conf 60579999966998999976146231234579999976155389984279999998721287629872652133200104
Q gi|254780812|r 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82 (346)
Q Consensus 3 ~~~~~~l~al~g~~~~r~PVW~MrQAGrylpey~~~r~~~~~f~~~~~~pela~evtl~p~~r~~~DaaIlFsDIl~~~e 82 (346)
T Consensus 5 ~~~~~fl~al~g~~vdr~PVw~mrqAgry~pey~~~r~~~~s~~d~~~~~e~~~evtl~p~~~~~~DAailf~DIlv~~~ 84 (352)
T COG0407 5 TKNDRFLRALKGKPVDRTPVWMMRQAGRYLPEYRALREKGGSFLEACKNPELAAEVTLQPVRRYGLDAAILFSDILVPPE 84 (352)
T ss_pred CHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEHHHCCCHH
T ss_conf 31779999974899997887766001245609999987527888885399999999964487729872530012201389
Q ss_pred HHCCCEEEECCCCCCC-CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 3244337316887522-233333554205670123443237877787642102453201111479999999961246776
Q gi|254780812|r 83 ALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161 (346)
Q Consensus 83 alG~~v~f~~~~GP~~-~p~~~~~~~~~~~~~~~~~~~l~~v~eAi~~~k~~l~~~~pLIGF~GgP~TlasYmieG~~sk 161 (346)
T Consensus 85 alG~~v~f~~~~gP~v~~~~~~~~~~~~~~~~~~~~~~~~~V~~ai~~lrekl~~~~pLIgf~gsP~TlAsymieg~~s~ 164 (352)
T COG0407 85 ALGCEVRFGEGKGPSVLKPIRDKEDVELLVPLLDPEGRLPYVLDAIKLLREKLGGEVPLIGFAGSPWTLASYLIEGGGSK 164 (352)
T ss_pred HCCCEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCCC
T ss_conf 84975632788799567897866666540577673110179999999999974899972875378799999997689841
Q ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCE
Q ss_conf 52467753013722289999999999999977777549816784383110068356777612722689999863088623
Q gi|254780812|r 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241 (346)
Q Consensus 162 ~~~~~~~~~~~~p~~~~~ll~~lt~~~~~yl~~Qi~aGad~iqIFDs~ag~Ls~~~f~~f~~p~~kkI~~~ik~~~~~vp 241 (346)
T Consensus 165 ~~~~~k~~m~~~P~~~~~ll~kltd~~i~Yl~~qi~aGAdavqifDsW~g~l~~~~~~~f~~~~~~~i~~~vk~~~~~~p 244 (352)
T COG0407 165 DFSKTKAMMYTEPDAVHALLDKLTDAVIEYLKAQIEAGADAVQIFDSWAGVLSMIDYDEFVLPYMKRIVREVKEVKGGVP 244 (352)
T ss_pred CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 18999999987989999999999999999999999818888986335555677425798845679999999887289986
Q ss_pred EECCCCCCCCCHHHHHCCCCCCEEECCCCCCHHHHHHH-CCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCC-CCEE
Q ss_conf 60243110000134201478722304677998999970-798469688884677099889999999999973259-9289
Q gi|254780812|r 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIF 319 (346)
Q Consensus 242 iI~f~~g~~~~l~~~~~~~g~d~isiD~~~dl~~a~~~-~~~~~lqGNldP~~L~~~~e~i~~~~~~~l~~~~~~-~~I~ 319 (346)
T Consensus 245 ii~f~~ga~~~l~~m~~-~g~d~l~vdw~v~l~~a~~~~~~~~~lqGNldP~lL~~~~~~i~~~~~~iL~~~~~~~~~If 323 (352)
T COG0407 245 VIHFCKGAGHLLEDMAK-TGFDVLGVDWRVDLKEAKKRLGDKVALQGNLDPALLYAPPEAIKEEVKRILEDGGDGSGYIF 323 (352)
T ss_pred EEEECCCCHHHHHHHHH-CCCCEEEECCCCCHHHHHHHHCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 89977882778999986-28867842135688999998388846883267276359999999999999997546788032
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 60897633668899999999997306
Q gi|254780812|r 320 NLGHGITPQVDPKNVLDLVKTVRSEK 345 (346)
Q Consensus 320 nLGhGi~p~tp~eNv~~~v~~vr~~~ 345 (346)
T Consensus 324 nlGhGI~P~tp~e~v~~lve~v~~~~ 349 (352)
T COG0407 324 NLGHGILPETPPENVKALVEAVHEYS 349 (352)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 68987699998799999999999863