HHsearch alignment for GI: 254780812 and conserved domain: PRK06252
>PRK06252 methylcobalamin:coenzyme M methyltransferase; Validated.
Probab=100.00 E-value=0 Score=635.89 Aligned_cols=326 Identities=21% Similarity=0.288 Sum_probs=279.1
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCEEC
Q ss_conf 97605799999669989999761462312345799999761553899842799999987212876298726521332001
Q gi|254780812|r 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80 (346)
Q Consensus 1 M~~~~~~~l~al~g~~~~r~PVW~MrQAGrylpey~~~r~~~~~f~~~~~~pela~evtl~p~~r~~~DaaIlFsDIl~~ 80 (346)
T Consensus 3 MT~-~ER~l~al~ge~vDR~Pvw~~~~ag--~~~~m~~~-G-~~~pE~~~~pe~~ae~~l~~~~~~g~D~~~~~~di~~~ 77 (339)
T PRK06252 3 LTP-KERLLRALKGKPVDRVPVICVTQTG--TVELMDIS-G-AYWPEAHSDAEKMAKLAIAGYEVAGFEAVRVPFCMTVE 77 (339)
T ss_pred CCH-HHHHHHHHCCCCCCCCCEECCCCCH--HHHHHHHH-C-CCCHHHHCCHHHHHHHHHHHHHHHCCCEEECHHHHHHH
T ss_conf 985-8999999778989999974354341--89999981-8-87354427999999999727987288734400333334
Q ss_pred CHHHCCCEEEEC-CCCC-CCC-CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 043244337316-8875-222-3333355420567012344323787778764210245320111147999999996124
Q gi|254780812|r 81 ADALGRNVRFVE-NEGP-RMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISG 157 (346)
Q Consensus 81 ~ealG~~v~f~~-~~GP-~~~-p~~~~~~~~~~~~~~~~~~~l~~v~eAi~~~k~~l~~~~pLIGF~GgP~TlasYmieG 157 (346)
T Consensus 78 ~ealG~~v~f~~~~~~p~v~~~~i~~~~d~~~l~~~~~~~~~l~~v~eai~~lk~~l~~~vpligf~ggP~Tla~yl~g- 156 (339)
T PRK06252 78 AEAMGCTVNMGTKDTQPSVTKHPYKKVEDWEKLPDILLEEGRIPVVLEAIKILKEKVGEDVPIIAGMTGPASLASSLAG- 156 (339)
T ss_pred HHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHH-
T ss_conf 9974998775257888988788889999996377677001005999999999999818986179646777999999874-
Q ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH--HCCHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 677652467753013722289999999999999977777549816784383110--068356777612722689999863
Q gi|254780812|r 158 GFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRR 235 (346)
Q Consensus 158 ~~sk~~~~~~~~~~~~p~~~~~ll~~lt~~~~~yl~~Qi~aGad~iqIFDs~ag--~Ls~~~f~~f~~p~~kkI~~~ik~ 235 (346)
T Consensus 157 --~~~~~---~~~~~~pe~~~~ll~~it~~~~~~~~~qi~aGad~i~ifDs~a~~~lls~~~f~ef~~p~~~~i~~~i~~ 231 (339)
T PRK06252 157 --VKNFL---KWLIKKPELAHEFIDFVTEACIEYAKAMLEAGADVIAIADPSASPELIGPEMFEEFVLPYLNKICKEVNG 231 (339)
T ss_pred --HHHHH---HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf --69999---9998799999999999999999999999982998789715755556769999999989999999997799
Q ss_pred HCCCCEEECCCCCCCCCHHHHHCCCCCCEEECCCCCCHHHHHH-HCCCEEEECCCCHHH-H-CCCHHHHHHHHHHHHHHH
Q ss_conf 0886236024311000013420147872230467799899997-079846968888467-7-099889999999999973
Q gi|254780812|r 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR-L-VVGNQVMIDGVNAILDVL 312 (346)
Q Consensus 236 ~~~~vpiI~f~~g~~~~l~~~~~~~g~d~isiD~~~dl~~a~~-~~~~~~lqGNldP~~-L-~~~~e~i~~~~~~~l~~~ 312 (346)
T Consensus 232 ----~~ilh~~g~~~~~~~~~~~-~g~d~~s~D~~~~l~~a~~~~g~~~~lqGNldP~~ll~~g~~e~i~~~~~~~l~~g 306 (339)
T PRK06252 232 ----PTILHICGDLTSILEELAD-CGFDGISIDEKVSVKQAKENVGNRARLIGNVSTSFTLLNGTPEDVKAEAKACLEDG 306 (339)
T ss_pred ----CEEEEECCCCHHHHHHHHH-CCCCEEEECCCCCHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHCC
T ss_conf ----8188865861378999996-49999971699999999998189917993689778766899999999999999718
Q ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 259928960897633668899999999997306
Q gi|254780812|r 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345 (346)
Q Consensus 313 ~~~~~I~nLGhGi~p~tp~eNv~~~v~~vr~~~ 345 (346)
T Consensus 307 ~---~I~n~Ghgi~p~tp~env~a~v~avr~y~ 336 (339)
T PRK06252 307 V---DILAPGCGIAPMTPLENIKAMVEARKEYY 336 (339)
T ss_pred C---CEEECCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 9---91689897699989999999999999854