HHsearch alignment for GI: 254780812 and conserved domain: TIGR01371
>TIGR01371 met_syn_B12ind 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; InterPro: IPR006276 This group represents cobalamin-independent methionine synthase. A family of uncharacterised archaeal proteins having substantial homology to the C-terminal region of this family, are not included in this group, though they are contained in a larger family of vitamin-B12 independent methionine synthase.; GO: 0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity, 0009086 methionine biosynthetic process.
Probab=95.59 E-value=0.26 Score=30.14 Aligned_cols=195 Identities=14% Similarity=0.174 Sum_probs=124.4
Q ss_pred HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCH-
Q ss_conf 1024532011114799999999612467765246775301372228999999999999997777754981678438311-
Q gi|254780812|r 132 KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA- 210 (346)
Q Consensus 132 ~~l~~~~pLIGF~GgP~TlasYmieG~~sk~~~~~~~~~~~~p~~~~~ll~~lt~~~~~yl~~Qi~aGad~iqIFDs~a- 210 (346)
T Consensus 564 QSLT-~KpVKGMLTGPVTIL~----------WSF----~R-~D~p~~~~A~QIALAlrdEV~DLE~AGI~iIQiDEPALR 627 (778)
T TIGR01371 564 QSLT-SKPVKGMLTGPVTILN----------WSF----VR-DDIPRKEIADQIALALRDEVLDLEEAGIKIIQIDEPALR 627 (778)
T ss_pred CCCC-CCCCCCCCCCCHHCCC----------CCC----CC-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHC
T ss_conf 2146-8897765683211035----------535----55-688879999999999999999998769817985407850
Q ss_pred -HH----CCH-HHHHHHHCCCHHHHHHHHHHHCCCCEEECCCC-CCCCCHHHHHCCCCCCEEECCCCC-CHHHHHHHCCC
Q ss_conf -00----683-56777612722689999863088623602431-100001342014787223046779-98999970798
Q gi|254780812|r 211 -GC----LGE-HEFENYAARSVGRIISAVRRKYPNAKFISFAK-GAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKE 282 (346)
Q Consensus 211 -g~----Ls~-~~f~~f~~p~~kkI~~~ik~~~~~vpiI~f~~-g~~~~l~~~~~~~g~d~isiD~~~-dl~~a~~~~~~ 282 (346)
T Consensus 628 EgLPLR~~d~h~~YL~WAV~aFrla~sgV~~~T-QI-HTHMCYSeFn~II~~I~~L-DADVIsIE~SRS~~~lL~~f~~~ 704 (778)
T TIGR01371 628 EGLPLRKSDWHSEYLDWAVEAFRLATSGVKDET-QI-HTHMCYSEFNDIIEAIAAL-DADVISIEASRSDMELLDAFKNI 704 (778)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-CC-CCCCCCCCHHHHHHHHHHC-CCCCEEHHHCCCCHHHHHHHHHH
T ss_conf 788877431104457899998777524888886-63-4433337743799988432-58710031104755799998520
Q ss_pred EEEECCCCHH--HHCCC----HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHCC
Q ss_conf 4696888846--77099----8899999999999732599289608976336688---99999999997306
Q gi|254780812|r 283 GPVQGNLDPM--RLVVG----NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDP---KNVLDLVKTVRSEK 345 (346)
Q Consensus 283 ~~lqGNldP~--~L~~~----~e~i~~~~~~~l~~~~~~~~I~nLGhGi~p~tp~---eNv~~~v~~vr~~~ 345 (346)
T Consensus 705 ~~Y~~giGpGVYDIHSPRvPS~eE~~~~~~~aL~~~p~~~lWVNPDCGLKTR~~~Ev~asLkNMV~AAK~~R 776 (778)
T TIGR01371 705 FGYPNGIGPGVYDIHSPRVPSVEEMADLIEKALQVLPAERLWVNPDCGLKTRNWEEVIASLKNMVEAAKAAR 776 (778)
T ss_pred CCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 364323487213226888673899999999999740055080578887877886156888999999999982