HHsearch alignment for GI: 254780812 and conserved domain: cd03307
>cd03307 Mta_CmuA_like MtaA_CmuA_like family. MtaA/CmuA, also MtsA, or methyltransferase 2 (MT2) MT2-A and MT2-M isozymes, are methylcobamide:Coenzyme M methyltransferases, which play a role in metabolic pathways of methane formation from various substrates, such as methylated amines and methanol. Coenzyme M, 2-mercaptoethylsulfonate or CoM, is methylated during methanogenesis in a reaction catalyzed by three proteins. A methyltransferase methylates the corrinoid cofactor, which is bound to a second polypeptide, a corrinoid protein. The methylated corrinoid protein then serves as a substrate for MT2-A and related enzymes, which methylate CoM.
Probab=100.00 E-value=0 Score=649.93 Aligned_cols=308 Identities=22% Similarity=0.315 Sum_probs=272.6
Q ss_pred HHHHCCCCCCCCCCH---------HHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCEE
Q ss_conf 999669989999761---------46231234579999976155389984279999998721287629872652133200
Q gi|254780812|r 9 LEVLQGNVINPPPIW---------LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79 (346)
Q Consensus 9 l~al~g~~~~r~PVW---------~MrQAGrylpey~~~r~~~~~f~~~~~~pela~evtl~p~~r~~~DaaIlFsDIl~ 79 (346)
T Consensus 1 l~Al~ge~~dR~PVw~~~~~g~~~~mrqaGr~lpEy~-------------~~~e~~ae~~l~p~~~~g~Daai~fsDilv 67 (326)
T cd03307 1 LAALNGQPVDRVPVICPTQTGTVELMEATGAYWPEAH-------------SDAEKMADLAAAGHEVAGFEAVRVPFCMTV 67 (326)
T ss_pred CCCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCHHHH-------------CCHHHHHHHHHHHHHHHCCCEEECCCCHHH
T ss_conf 9300489899999633653328999999389816675-------------699999999970898709986774633212
Q ss_pred CCHHHCCCEEEECCC-CCCC-C-CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 104324433731688-7522-2-333335542056701234432378777876421024532011114799999999612
Q gi|254780812|r 80 IADALGRNVRFVENE-GPRM-D-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMIS 156 (346)
Q Consensus 80 ~~ealG~~v~f~~~~-GP~~-~-p~~~~~~~~~~~~~~~~~~~l~~v~eAi~~~k~~l~~~~pLIGF~GgP~TlasYmie 156 (346)
T Consensus 68 ~~ealG~~v~f~~~~~~P~v~~~~i~~~~d~~~l~~~~~~~~~l~~v~eai~~lr~~l~~~vpliGf~g~P~Tla~~l~g 147 (326)
T cd03307 68 EAEALGCEVDWGTKDIQPSVTSHPFKKLEDVEKLPDDFLERGRIPTVLEAIKILKEKYGEEVPVIGGMTGPASLASHLAG 147 (326)
T ss_pred HHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHC
T ss_conf 08980982340478889856788889999996177654000125899999999999718997669870768999999757
Q ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH--HCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf 4677652467753013722289999999999999977777549816784383110--06835677761272268999986
Q gi|254780812|r 157 GGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVR 234 (346)
Q Consensus 157 G~~sk~~~~~~~~~~~~p~~~~~ll~~lt~~~~~yl~~Qi~aGad~iqIFDs~ag--~Ls~~~f~~f~~p~~kkI~~~ik 234 (346)
T Consensus 148 ---~~~~~---~~~~~~p~~~~~lL~~itd~~i~~~~~qi~aGad~i~ifDs~a~~~lls~~~f~ef~~p~~~~i~~~i~ 221 (326)
T cd03307 148 ---VENFL---KWLIKKPEKVREFLEFLTEACIEYAKAQLEAGADIITIADPTASPELISPEFYEEFALPYHKKIVKELH 221 (326)
T ss_pred ---HHHHH---HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf ---59999---999879999999999999999999999998488878863565653458999999999999999999658
Q ss_pred HHCCCCE-EECCCCCCCCCHHHHHCCCCCCEEECCCCCCHHHHHH-HCCCEEEECCCCHHH-H-CCCHHHHHHHHHHHHH
Q ss_conf 3088623-6024311000013420147872230467799899997-079846968888467-7-0998899999999999
Q gi|254780812|r 235 RKYPNAK-FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR-L-VVGNQVMIDGVNAILD 310 (346)
Q Consensus 235 ~~~~~vp-iI~f~~g~~~~l~~~~~~~g~d~isiD~~~dl~~a~~-~~~~~~lqGNldP~~-L-~~~~e~i~~~~~~~l~ 310 (346)
T Consensus 222 ~----~~~i~h~~G~~~~~~~~~~~-~g~d~is~D~~~~l~~a~~~~~~~~~iqGNldP~~ll~~g~~e~i~~~~~~~l~ 296 (326)
T cd03307 222 G----CPTILHICGNTTPILEYIAQ-CGFDGISVDEKVDVKTAKEIVGGRAALIGNVSPSQTLLNGTPEDVKAEARKCLE 296 (326)
T ss_pred C----CCEEEEECCCHHHHHHHHHH-CCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHH
T ss_conf 9----98278845875889999997-199899668989999999980898169942884898767999999999999997
Q ss_pred HHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 732599289608976336688999999999973
Q gi|254780812|r 311 VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343 (346)
Q Consensus 311 ~~~~~~~I~nLGhGi~p~tp~eNv~~~v~~vr~ 343 (346)
T Consensus 297 ~g---~~I~nlGhgi~p~tp~env~a~v~avkE 326 (326)
T cd03307 297 DG---VDILAPGCGIAPRTPLANLKAMVEARKE 326 (326)
T ss_pred CC---CCEEECCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 38---9955898966999899999999998629