HHsearch alignment for GI: 254780812 and conserved domain: pfam01208
>pfam01208 URO-D Uroporphyrinogen decarboxylase (URO-D).
Probab=100.00 E-value=0 Score=667.37 Aligned_cols=334 Identities=42% Similarity=0.685 Sum_probs=303.0
Q ss_pred CHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCEECCH
Q ss_conf 60579999966998999976146231234579999976155389984279999998721287629872652133200104
Q gi|254780812|r 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82 (346)
Q Consensus 3 ~~~~~~l~al~g~~~~r~PVW~MrQAGrylpey~~~r~~~~~f~~~~~~pela~evtl~p~~r~~~DaaIlFsDIl~~~e 82 (346)
T Consensus 1 t~~er~~~al~g~~~Dr~Pv~~~rqagr~~~~~~~~~~g~-~~~e~~~d~e~~ae~~~~~~~~~g~D~~~~~~di~~~~e 79 (337)
T pfam01208 1 TPNERLLRALRGEPVDRVPVWLMRQAGRYLPEYRALRAGA-SFLEACKDPELAAEVTLQPYRRFGLDAAILFSDILVEAE 79 (337)
T ss_pred CCHHHHHHHHCCCCCCCCCEEECHHCCCCCHHHHHHHCCC-CHHHHHCCHHHHHHHHHHHHHHHCCCEEECCCCEEECHH
T ss_conf 9778999997699899998862010222378999988399-989983799999999999999819765644566022158
Q ss_pred HHCCCEEEECCCCCCCC-CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 32443373168875222-33333554205670123443237877787642102453201111479999999961246776
Q gi|254780812|r 83 ALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161 (346)
Q Consensus 83 alG~~v~f~~~~GP~~~-p~~~~~~~~~~~~~~~~~~~l~~v~eAi~~~k~~l~~~~pLIGF~GgP~TlasYmieG~~sk 161 (346)
T Consensus 80 alG~~v~~~~~~~P~v~~~~~~~~d~~~l~~~d~~~~~l~~v~eai~~l~~~l~~~~plig~~~gP~Tla~~l~~G---- 155 (337)
T pfam01208 80 AMGCEVDFGEGEGPVVENPIRTPEDVDKLEVPDDEEDRLPYVLEAIRLLRKELGDEVPLIGFVGGPFTLASYLVEG---- 155 (337)
T ss_pred HCCCEEECCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCC----
T ss_conf 6197462169999998887688778986668883011028999999999997599974798647789999999779----
Q ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCE
Q ss_conf 52467753013722289999999999999977777549816784383110068356777612722689999863088623
Q gi|254780812|r 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241 (346)
Q Consensus 162 ~~~~~~~~~~~~p~~~~~ll~~lt~~~~~yl~~Qi~aGad~iqIFDs~ag~Ls~~~f~~f~~p~~kkI~~~ik~~~~~vp 241 (346)
T Consensus 156 -~~~~~~~l~~~pe~~~~ll~~~t~~~~~~~~~qi~aGad~i~i~Ds~~~~ls~~~~~ef~~p~~~~i~~~ik~~~~~-~ 233 (337)
T pfam01208 156 -FEKFKKLMYKDPELVHALLDKLTDAVIEYLKAQIEAGADAIQIFDSWAGLLSPEDFREFVLPYLKRIVDEVKARGPG-P 233 (337)
T ss_pred -HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-C
T ss_conf -89999999979999999999999999999999998299679983478887898999999899999999999986899-7
Q ss_pred EECCCCCCC-CCHHHHHCCCCCCEEECCCCCCHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCC-CCCEE
Q ss_conf 602431100-0013420147872230467799899997079846968888467709988999999999997325-99289
Q gi|254780812|r 242 FISFAKGAG-YMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS-GPFIF 319 (346)
Q Consensus 242 iI~f~~g~~-~~l~~~~~~~g~d~isiD~~~dl~~a~~~~~~~~lqGNldP~~L~~~~e~i~~~~~~~l~~~~~-~~~I~ 319 (346)
T Consensus 234 ~ilh~cG~~~~~~~~l~~-~~~~~~s~d~~~~l~~~~~~~~~~~i~GN~dp~~l~gt~e~i~~~~~~~l~~~~~~~g~Il 312 (337)
T pfam01208 234 VILHICGNGTPILEDMAE-TGADVISLDWTVDLAEAKRIVGDVALQGNLDPALLLGTPEEIEAEVKEILEAAGGGRGHIF 312 (337)
T ss_pred EEEEECCCHHHHHHHHHH-CCCCEEECCCCCCHHHHHHHCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 499857966899999986-4988884476568999999769953896898678569999999999999998289999898
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 6089763366889999999999730
Q gi|254780812|r 320 NLGHGITPQVDPKNVLDLVKTVRSE 344 (346)
Q Consensus 320 nLGhGi~p~tp~eNv~~~v~~vr~~ 344 (346)
T Consensus 313 ~~Gc~i~~~tp~env~a~v~avr~~ 337 (337)
T pfam01208 313 NLGHGIPPDTPPENVKALVEAVHEY 337 (337)
T ss_pred ECCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 5999899998999999999999609