HHsearch alignment of GI: 254780812 and MMDB domain: 1u1j_A_394-411_488-681
>1u1j_A (A:394-411,A:488-681) 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana}
Probab=97.08 E-value=0.0019 Score=44.67 Aligned_cols=126 Identities=13% Similarity=0.074 Sum_probs=79.9
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 77876421024532011114799999999612467765246775301372228999999999999997777754981678
Q gi|254780812|r 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204 (346)
Q Consensus 125 eAi~~~k~~l~~~~pLIGF~GgP~TlasYmieG~~sk~~~~~~~~~~~~p~~~~~ll~~lt~~~~~yl~~Qi~aGad~iq 204 (346)
+-.+.+++.-+ +|+=...-||.|++..+.. . -|.+ ..+++.-++++..+-++...++|+..||
T Consensus 72 e~~~~lk~~~~--~~~K~tipgP~tl~~~~~~-----~-------~Y~~---~eel~~Dia~a~r~Ei~~L~~aG~r~IQ 134 (212)
T 1u1j_A 72 FWSAXAQSXTS--RPXKGXLTGPVTILNWSFV-----R-------NDQP---RHETCYQIALAIKDEVEDLEKGGIGVIQ 134 (212)
T ss_dssp HHHHHHTTSCS--SCBEEEEECHHHHHHTSEE-----C-------TTSC---HHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHCCC--CCCCCCCCCHHHHHHHHCC-----C-------CCCC---HHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99999985147--5656545628999853125-----3-------5799---9999999999999999999986998899
Q ss_pred ECCC-CHHHC-----CHHHHHHHHCCCHHHHHHHHHHHCCCCEE-ECCCCCC-CCCHHHHHCCCCCCEEECCCCC
Q ss_conf 4383-11006-----83567776127226899998630886236-0243110-0001342014787223046779
Q gi|254780812|r 205 IFDT-HAGCL-----GEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGA-GYMLKNYRRLTDSNAIGLDWSV 271 (346)
Q Consensus 205 IFDs-~ag~L-----s~~~f~~f~~p~~kkI~~~ik~~~~~vpi-I~f~~g~-~~~l~~~~~~~g~d~isiD~~~ 271 (346)
|=|+ |+..+ .++.+.+++...++++++.+.. ++.+ +|+|+|+ ...+..+.+ .++|+++++...
T Consensus 135 iDeP~l~~~~~~~~~d~~~~~~~~i~a~N~a~~~~p~---d~~i~~HvCrGny~~i~~~l~~-~~vD~~~lE~a~ 205 (212)
T 1u1j_A 135 IDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQD---STQIHTHXCYSHFNDIIHSIID-XDADVITIENSR 205 (212)
T ss_dssp EECTTSSTTCCSSGGGHHHHHHHHHHHHHHHHTTSCS---SSEEEEECSCSCCTTTHHHHHT-TCCSEEECCBSS
T ss_pred ECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC---CCEEEEEECCCCHHHHHHHHHC-CCCCEEEEECCC
T ss_conf 6571553447755457999999999999998559998---9889998338874999999962-998889986388