HHsearch results for GI: 254780812 and protein with PDBid: 2inf_A

>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=100.00  E-value=0  Score=748.76  Aligned_cols=336  Identities=33%  Similarity=0.557  Sum_probs=312.3

Q ss_pred             HHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCEECCHH
Q ss_conf             05799999669989999761462312345799999761553899842799999987212876298726521332001043
Q gi|254780812|r    4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA   83 (346)
Q Consensus         4 ~~~~~l~al~g~~~~r~PVW~MrQAGrylpey~~~r~~~~~f~~~~~~pela~evtl~p~~r~~~DaaIlFsDIl~~~ea   83 (346)
                      .|+|||+||+||++||+||||||||||||||||++|+++ +|+|+|+|||+++|+|+||++|||+||||+||||++++||
T Consensus        13 ~~~~fl~al~ge~~dr~Pvw~MrQAGr~lpey~~~r~~~-~f~e~~~~pe~~ae~tl~p~~~fg~DaaiifsDil~~~ea   91 (359)
T 2inf_A           13 FNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKY-GLFEITHQPELCAYVTRLPVEQYGVDAAILYKDIMTPLPS   91 (359)
T ss_dssp             CCCHHHHHHTTCCCSSCCBCCTTSSSTTSHHHHHHHHHH-HHHHHHHCHHHHHHHHHHHHHHHCCSCEECCCCTTTTGGG
T ss_pred             CHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCC-CHHHHHCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
T ss_conf             416999997699899999898865531578999998639-9888865999999999859997099879860220777997


Q ss_pred             HCCCEEEECCCCCCCC-CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             2443373168875222-333335542056701234432378777876421024532011114799999999612467765
Q gi|254780812|r   84 LGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD  162 (346)
Q Consensus        84 lG~~v~f~~~~GP~~~-p~~~~~~~~~~~~~~~~~~~l~~v~eAi~~~k~~l~~~~pLIGF~GgP~TlasYmieG~~sk~  162 (346)
                      ||++++|.+|.||+++ ++...++...... ....+.+.++.+++++++++ .+++|||||||||||||+||++|+++++
T Consensus        92 lG~~v~~~~~~~p~~~~~~~~~~d~~~~~~-~d~~~~~~~~~~~i~~~~~~-~~~~pligf~ggP~Tla~yl~~g~~~~~  169 (359)
T 2inf_A           92 IGVDVEIKNGIGPVIDQPIRSLADIEKLGQ-IDPEQDVPYVLETIKLLVNE-QLNVPLIGFSGAPFTLASYMTEGGPSKN  169 (359)
T ss_dssp             GTCCEECCSSSCCEESSCCCSHHHHHTCCC-CCHHHHSHHHHHHHHHHHHH-TCSSCEEEEEECHHHHHHHHHHCSCCSS
T ss_pred             CCCCEEECCCCCCCCCCCCCCHHHHHHCCC-CCHHHHHHHHHHHHHHHHHC-CCCCCEEEECCCHHHHHHHHHCCCCCHH
T ss_conf             498457517999877666679888975356-78788679999999998622-4666426431768989999861743022


Q ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCEE
Q ss_conf             24677530137222899999999999999777775498167843831100683567776127226899998630886236
Q gi|254780812|r  163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF  242 (346)
Q Consensus       163 ~~~~~~~~~~~p~~~~~ll~~lt~~~~~yl~~Qi~aGad~iqIFDs~ag~Ls~~~f~~f~~p~~kkI~~~ik~~~~~vpi  242 (346)
                      +.+++++++++|+.+++||+++|+++++|+++|+++|||+|||||||||.||+++|++|++||+++|++.+++.  ++|+
T Consensus       170 ~~~~~~~~~~~pe~~~~ll~~~t~~~i~~~~~qi~aGad~i~ifDs~a~~l~~~~~~~~~~~~~k~i~~~~~~~--~~~~  247 (359)
T 2inf_A          170 YNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE--NVPL  247 (359)
T ss_dssp             CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGG--CSCE
T ss_pred             HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCHHHHHCEEEHHHHHHHHHHCCC--CCCE
T ss_conf             68888787658578999999999999999999997079889970764565786753346311676665553157--8877


Q ss_pred             ECCCCCCCCCHHHHHCCCCCCEEECCCCCCHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHC-CCCCEEEE
Q ss_conf             02431100001342014787223046779989999707984696888846770998899999999999732-59928960
Q gi|254780812|r  243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG-SGPFIFNL  321 (346)
Q Consensus       243 I~f~~g~~~~l~~~~~~~g~d~isiD~~~dl~~a~~~~~~~~lqGNldP~~L~~~~e~i~~~~~~~l~~~~-~~~~I~nL  321 (346)
                      ||||++++..++.+.+ +|+|++|+||.+|+++|++.+++++|||||||.+|++++|+++++|+++|+.+. +.||||||
T Consensus       248 i~~~~~~~~~~~~~~~-~g~d~isid~~~~l~~a~~~~~~~~lqGNldP~~L~~~~e~i~~~~~~~l~~~~~~~g~I~nl  326 (359)
T 2inf_A          248 IMFGVGASHLAGDWHD-LPLDVVGLDWRLGIDEARSKGITKTVQGNLDPSILLAPWEVIEQKTKEILDQGMESDGFIFNL  326 (359)
T ss_dssp             EEECTTCGGGHHHHHT-SSCSEEECCTTSCHHHHHHTTCCSEEECCBCGGGGGSCHHHHHHHHHHHHHHHTTSSCEEBCB
T ss_pred             EEECCCCCCCHHHHHC-CCCCEECCCCCCCHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf             8867885331134533-677543125668999999828991798488968978999999999999999846899989869


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             897633668899999999997306
Q gi|254780812|r  322 GHGITPQVDPKNVLDLVKTVRSEK  345 (346)
Q Consensus       322 GhGi~p~tp~eNv~~~v~~vr~~~  345 (346)
                      ||||+|+||+|||++||++||+|+
T Consensus       327 Ghgi~p~tp~env~a~v~avr~y~  350 (359)
T 2inf_A          327 GHGVFPDVSPEVLKKLTAFVHEYS  350 (359)
T ss_dssp             SSCCCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf             998498989999999999999958