HHsearch results for GI: 254780812 and protein with PDBid: 2inf_A
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=0 Score=748.76 Aligned_cols=336 Identities=33% Similarity=0.557 Sum_probs=312.3
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCEECCHH
Q ss_conf 05799999669989999761462312345799999761553899842799999987212876298726521332001043
Q gi|254780812|r 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83 (346)
Q Consensus 4 ~~~~~l~al~g~~~~r~PVW~MrQAGrylpey~~~r~~~~~f~~~~~~pela~evtl~p~~r~~~DaaIlFsDIl~~~ea 83 (346)
.|+|||+||+||++||+||||||||||||||||++|+++ +|+|+|+|||+++|+|+||++|||+||||+||||++++||
T Consensus 13 ~~~~fl~al~ge~~dr~Pvw~MrQAGr~lpey~~~r~~~-~f~e~~~~pe~~ae~tl~p~~~fg~DaaiifsDil~~~ea 91 (359)
T 2inf_A 13 FNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKY-GLFEITHQPELCAYVTRLPVEQYGVDAAILYKDIMTPLPS 91 (359)
T ss_dssp CCCHHHHHHTTCCCSSCCBCCTTSSSTTSHHHHHHHHHH-HHHHHHHCHHHHHHHHHHHHHHHCCSCEECCCCTTTTGGG
T ss_pred CHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCC-CHHHHHCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
T ss_conf 416999997699899999898865531578999998639-9888865999999999859997099879860220777997
Q ss_pred HCCCEEEECCCCCCCC-CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 2443373168875222-333335542056701234432378777876421024532011114799999999612467765
Q gi|254780812|r 84 LGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD 162 (346)
Q Consensus 84 lG~~v~f~~~~GP~~~-p~~~~~~~~~~~~~~~~~~~l~~v~eAi~~~k~~l~~~~pLIGF~GgP~TlasYmieG~~sk~ 162 (346)
||++++|.+|.||+++ ++...++...... ....+.+.++.+++++++++ .+++|||||||||||||+||++|+++++
T Consensus 92 lG~~v~~~~~~~p~~~~~~~~~~d~~~~~~-~d~~~~~~~~~~~i~~~~~~-~~~~pligf~ggP~Tla~yl~~g~~~~~ 169 (359)
T 2inf_A 92 IGVDVEIKNGIGPVIDQPIRSLADIEKLGQ-IDPEQDVPYVLETIKLLVNE-QLNVPLIGFSGAPFTLASYMTEGGPSKN 169 (359)
T ss_dssp GTCCEECCSSSCCEESSCCCSHHHHHTCCC-CCHHHHSHHHHHHHHHHHHH-TCSSCEEEEEECHHHHHHHHHHCSCCSS
T ss_pred CCCCEEECCCCCCCCCCCCCCHHHHHHCCC-CCHHHHHHHHHHHHHHHHHC-CCCCCEEEECCCHHHHHHHHHCCCCCHH
T ss_conf 498457517999877666679888975356-78788679999999998622-4666426431768989999861743022
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCEE
Q ss_conf 24677530137222899999999999999777775498167843831100683567776127226899998630886236
Q gi|254780812|r 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242 (346)
Q Consensus 163 ~~~~~~~~~~~p~~~~~ll~~lt~~~~~yl~~Qi~aGad~iqIFDs~ag~Ls~~~f~~f~~p~~kkI~~~ik~~~~~vpi 242 (346)
+.+++++++++|+.+++||+++|+++++|+++|+++|||+|||||||||.||+++|++|++||+++|++.+++. ++|+
T Consensus 170 ~~~~~~~~~~~pe~~~~ll~~~t~~~i~~~~~qi~aGad~i~ifDs~a~~l~~~~~~~~~~~~~k~i~~~~~~~--~~~~ 247 (359)
T 2inf_A 170 YNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE--NVPL 247 (359)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGG--CSCE
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCHHHHHCEEEHHHHHHHHHHCCC--CCCE
T ss_conf 68888787658578999999999999999999997079889970764565786753346311676665553157--8877
Q ss_pred ECCCCCCCCCHHHHHCCCCCCEEECCCCCCHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHC-CCCCEEEE
Q ss_conf 02431100001342014787223046779989999707984696888846770998899999999999732-59928960
Q gi|254780812|r 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG-SGPFIFNL 321 (346)
Q Consensus 243 I~f~~g~~~~l~~~~~~~g~d~isiD~~~dl~~a~~~~~~~~lqGNldP~~L~~~~e~i~~~~~~~l~~~~-~~~~I~nL 321 (346)
||||++++..++.+.+ +|+|++|+||.+|+++|++.+++++|||||||.+|++++|+++++|+++|+.+. +.||||||
T Consensus 248 i~~~~~~~~~~~~~~~-~g~d~isid~~~~l~~a~~~~~~~~lqGNldP~~L~~~~e~i~~~~~~~l~~~~~~~g~I~nl 326 (359)
T 2inf_A 248 IMFGVGASHLAGDWHD-LPLDVVGLDWRLGIDEARSKGITKTVQGNLDPSILLAPWEVIEQKTKEILDQGMESDGFIFNL 326 (359)
T ss_dssp EEECTTCGGGHHHHHT-SSCSEEECCTTSCHHHHHHTTCCSEEECCBCGGGGGSCHHHHHHHHHHHHHHHTTSSCEEBCB
T ss_pred EEECCCCCCCHHHHHC-CCCCEECCCCCCCHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 8867885331134533-677543125668999999828991798488968978999999999999999846899989869
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 897633668899999999997306
Q gi|254780812|r 322 GHGITPQVDPKNVLDLVKTVRSEK 345 (346)
Q Consensus 322 GhGi~p~tp~eNv~~~v~~vr~~~ 345 (346)
||||+|+||+|||++||++||+|+
T Consensus 327 Ghgi~p~tp~env~a~v~avr~y~ 350 (359)
T 2inf_A 327 GHGVFPDVSPEVLKKLTAFVHEYS 350 (359)
T ss_dssp SSCCCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 998498989999999999999958