HHSEARCH alignment of GI: 254780812 and SCOP domain: d1r3sa_

Alignment
>d1r3sa_ c.1.22.1 (A:) Uroporphyrinogen decarboxylase, UROD {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=773.84  Aligned_cols=342  Identities=36%  Similarity=0.654  Sum_probs=321.7

Q ss_pred             CCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCEECC
Q ss_conf             76057999996699899997614623123457999997615538998427999999872128762987265213320010
Q gi|254780812|r    2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIA   81 (346)
Q Consensus         2 ~~~~~~~l~al~g~~~~r~PVW~MrQAGrylpey~~~r~~~~~f~~~~~~pela~evtl~p~~r~~~DaaIlFsDIl~~~   81 (346)
                      .-+|+|||+||+|+++||+||||||||||||||||++|++ +||+|+|+|||+++|+||||++|||+||||+|||||+++
T Consensus         3 ~~~ne~~l~al~g~~~dr~PVw~MrqAGRylpey~~~r~~-~~f~e~~~~pe~~ae~tl~p~~~~~~DaaiifsDil~~~   81 (356)
T d1r3sa_           3 ELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSGILVVP   81 (356)
T ss_dssp             CCSCCHHHHHHHTCCCSSCCBCCTTSSSTTSHHHHHHHHT-SCHHHHHTCHHHHHHHHHHHHHHSCCSCEECCCCTTHHH
T ss_pred             CCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHC-CCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHH
T ss_conf             7644899999759989999988884454258899998712-899998559999999984489867954256224421013


Q ss_pred             HHHCCCEEEECCCCCCCC-CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             432443373168875222-3333355420567012344323787778764210245320111147999999996124677
Q gi|254780812|r   82 DALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI  160 (346)
Q Consensus        82 ealG~~v~f~~~~GP~~~-p~~~~~~~~~~~~~~~~~~~l~~v~eAi~~~k~~l~~~~pLIGF~GgP~TlasYmieG~~s  160 (346)
                      +|||++|+|.+|.||+++ +....++.....+.+...+++++|+||++++|++|++++|||||+|||||||+||++|+++
T Consensus        82 ealG~~v~f~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~l~~v~eai~~~~~~l~~~~pliGf~ggP~Tla~yli~~~~~  161 (356)
T d1r3sa_          82 QALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGS  161 (356)
T ss_dssp             HHTTCCCEEETTTEEECSSCCCSGGGGGGSCCGGGHHHHTHHHHHHHHHHHHHHTTSSCEEEEEECHHHHHHHHHHSSCC
T ss_pred             HHCCCEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHCCCC
T ss_conf             42286356448898667764332023321011000021448999999999987355656630320318889998721342


Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHC---
Q ss_conf             65246775301372228999999999999997777754981678438311006835677761272268999986308---
Q gi|254780812|r  161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY---  237 (346)
Q Consensus       161 k~~~~~~~~~~~~p~~~~~ll~~lt~~~~~yl~~Qi~aGad~iqIFDs~ag~Ls~~~f~~f~~p~~kkI~~~ik~~~---  237 (346)
                      +++.+.+.+|+++|+.+|++|+++|+.+++|+++|+++|||+|||||||||+||+++|++|+.||+++|++.+++++   
T Consensus       162 ~~~~~~~~~~~~~pe~~~~ll~~lt~~~~~~~~~qi~aGad~i~ifDs~a~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~  241 (356)
T d1r3sa_         162 STMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREA  241 (356)
T ss_dssp             SSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             13788988763035778899999999889999998605665402035201213578888888999999999998751012


Q ss_pred             --CCCEEECCCCCCCCCHHHHHCCCCCCEEECCCCCCHHHHHH-HCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCC
Q ss_conf             --86236024311000013420147872230467799899997-079846968888467709988999999999997325
Q gi|254780812|r  238 --PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS  314 (346)
Q Consensus       238 --~~vpiI~f~~g~~~~l~~~~~~~g~d~isiD~~~dl~~a~~-~~~~~~lqGNldP~~L~~~~e~i~~~~~~~l~~~~~  314 (346)
                        .++|++|||++++..++.+.+ +|+|++|+||.+|+.++++ ++++++||||+||..|++++|+++++|+++|+.+++
T Consensus       242 ~~~~~~~i~~~~~~~~~l~~~~~-~g~d~is~D~~~~l~~~~~~~~~~i~lqGNldP~~L~~~~e~i~~~~~~~l~~~~~  320 (356)
T d1r3sa_         242 GLAPVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGP  320 (356)
T ss_dssp             TCCCCCEEEEETTCGGGHHHHTT-SSCSEEECCTTSCHHHHHHHHCSSSEEEEEECGGGGGSCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEECCHHHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCC
T ss_conf             47773021010447878888742-48561254235799999998489832882888899859999999999999998189


Q ss_pred             CCCEEEECCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             9928960897633668899999999997306
Q gi|254780812|r  315 GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK  345 (346)
Q Consensus       315 ~~~I~nLGhGi~p~tp~eNv~~~v~~vr~~~  345 (346)
                      +||||||||||+|+||+|||++||++||+|+
T Consensus       321 ~~~I~nlGhGI~p~tp~env~a~v~~vr~~~  351 (356)
T d1r3sa_         321 HRYIANLGHGLYPDMDPEHVGAFVDAVHKHS  351 (356)
T ss_dssp             SSEEEEESSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf             9948969997598999999999999999968


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: UROD/MetE-like
family: Uroporphyrinogen decarboxylase, UROD
domain: Uroporphyrinogen decarboxylase, UROD
species: Human (Homo sapiens) [TaxId: 9606]